1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GTATGGGTATGTGACCCCAGAAGATGTACCTATTCTTTTGGAGCAGCACATCAACAAAGGCGAGATTGTAGACCGGCTATGGAGgtacgtacaaagttttcttgttctgtcagttttctcgcagtttccggattagtggtaattggtagattcacacatgatgcttctctgattattag
species | Arabidopsis thaliana |
transcript | AT4G26620.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: CTTTTGGAGCAGCACATCAACAAAGGCGAGATTGTAGACCGGCTATGGAG GGGTGAAATGGGTCTATCAGAAGAAGATCAGAAGAEST: gi|124721251|gb|EH812653.1|EH812653
genomic: CTTTTGGAGCAGCACATCAACAAAGGCGAGATTGTAGACCGGCTATGGAGgtacgtacaa ... tgattattagGGGTGAAATGGGTCTATCAGAAGAAGATCAGAAGA
EST: CTTTTGGAGCAGCACATCAACAAAGGCGAGATTGTAGACCGGCTATGGAG GGGTGAAATGGGTCTATCAGAAGAAGATCAGAAGAAAACTCAAGAAEST: gi|124955362|gb|EL030382.1|EL030382
genomic: CTTTTGGAGCAGCACATCAACAAAGGCGAGATTGTAGACCGGCTATGGAGgtacgtacaa ... tgattattagGGGTGAAATGGGTCTATCAGAAGAAGATCAGAAGAAAACTCAAGAA
EST: CTTTTGGAGCAGCACATCAACAAAGGCGAGATTGTAGACCGGCTATGGAG GGGTGAAATGGGTCTATCAGAAGAAGATCAGAAGAEST: gi|164143901|gb|EL972650.1|EL972650
genomic: CTTTTGGAGCAGCACATCAACAAAGGCGAGATTGTAGACCGGCTATGGAGgtacgtacaa ... tgattattagGGGTGAAATGGGTCTATCAGAAGAAGATCAGAAGA
EST: GACCGGCTATGGAG GGGTGAAATGGGTCTATCAGAAGAAGATCAGAAGAAAACTCAAGAAGGGCG
genomic: GACCGGCTATGGAGgtacgtacaa ... tgattattagGGGTGAAATGGGTCTATCAGAAGAAGATCAGAAGAAAACTCAAGAAGGGCG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTATGGGTATGTGACCCCAGAAGATGTACCTATTCTTTTGGAGCAGCACATCAACAAAGGCGAGATTGTAGACCGGCTATGGAGgtacgtacaaagttttcttgttctgtcagttttctcgcagtttccggattagtggtaattggtagattcacacatgatgcttctctgattattag
- - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - GGAGCA
- - - - - - - - - - - - - - - - - - - - GAGCAG