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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTGGACAAACAAGCATCAGgtagcttaatgacctcgtttctcatttctagatatgatgaacatattgcatctactgtgaaggaatgaagaacagaaatgctccatcaagattatactgtttttgttttgcccaattttctaatggtatttttgacag

Basic information

species Arabidopsis thaliana
transcript AT2G24765.1
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|124933836|gb|EL010958.1|EL010958
EST:     ATTTAGGTGGACAAACAAGCATCAG                         GCCATACTGGCGATGCTATTTCCCGAATACACAGGCAGTGATCTAT
genomic: ATTTAGGTGGACAAACAAGCATCAGgtagcttaat ... tttttgacagGCCATACTGGCGATGCTATTTCCCGAATACACAAGCAGTGATCTAT
EST: gi|19877752|gb|AU238583.1|AU238583
EST:     ATTTAGGTGGACAAACAAGCATCAG                         GCCATACTGGCGATGCTATTTCCCGAATACACAAGCAGTGATCTATGTTGT
genomic: ATTTAGGTGGACAAACAAGCATCAGgtagcttaat ... tttttgacagGCCATACTGGCGATGCTATTTCCCGAATACACAAGCAGTGATCTATGTTGT