Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
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 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AAGGTTGATCTTACCAAGTTGGATATGGCTGCATTACTGAGATATTGGCGACATTTTAACCTCgtgagttcaaaagaaacaatcttatgttactgattattgtggaagagagtgttttgttttttacaacaggtgattcattgatctctttttcgtatag

Basic information

species Arabidopsis thaliana
transcript AT1G75060.1
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|116395789|gb|EG438381.1|EG438381
EST:     CCAAGTTGGATATGGCTGCATTACTGAGATATTGGCGACATTTTAACCTC                         GTGGATGTTCTTCCGAATCCCACAAAGGAGCAACTAATTGACATTATTCAG
genomic: CCAAGTTGGATATGGCTGCATTACTGAGATATTGGCGACATTTTAACCTCgtgagttcaa ... tttcgtatagGTGGATGCTCTTCCGAATCCCACAAAGGAGCAACTAATTGACATTATTCAG
EST: gi|116395783|gb|EG438375.1|EG438375
EST:     CCAAGTTGGATATGGCTGCATTACTGAGATATTGGCGACATTTTAACCTC                         GTGGATGCTCTTCCGAATCCCACAAAGGAGCAACTAATTGACATTATTCAG
genomic: CCAAGTTGGATATGGCTGCATTACTGAGATATTGGCGACATTTTAACCTCgtgagttcaa ... tttcgtatagGTGGATGCTCTTCCGAATCCCACAAAGGAGCAACTAATTGACATTATTCAG
EST: gi|116395799|gb|EG438391.1|EG438391
EST:     CCAAGTTGGATATGGCTGCATTACTGAGATATTGGCGACATTTTAACCTC                         GTGGATGCTCTTCCGAATCCCACAAAGGAGCAACTAATTGACATTATTCAG
genomic: CCAAGTTGGATATGGCTGCATTACTGAGATATTGGCGACATTTTAACCTCgtgagttcaa ... tttcgtatagGTGGATGCTCTTCCGAATCCCACAAAGGAGCAACTAATTGACATTATTCAG
EST: gi|116395785|gb|EG438377.1|EG438377
EST:     CCAAGTTGGATATGGCTGCATTACTGAGATATTGGCGACATTTTAACCTC                         GTGGATGCTCTTCCGAATCCCACAAAGGAGCAACTAATTGACATTATTCAG
genomic: CCAAGTTGGATATGGCTGCATTACTGAGATATTGGCGACATTTTAACCTCgtgagttcaa ... tttcgtatagGTGGATGCTCTTCCGAATCCCACAAAGGAGCAACTAATTGACATTATTCAG
EST: gi|116395788|gb|EG438380.1|EG438380
EST:     CCAAGTTGGATATGGCTGCATTACTGAGATATTGGCGACATTTTAACCTC                         GTGGATGCTCTTCCGAATCCCACAAAGGAGCAACTAATTGACATTATTCAG
genomic: CCAAGTTGGATATGGCTGCATTACTGAGATATTGGCGACATTTTAACCTCgtgagttcaa ... tttcgtatagGTGGATGCTCTTCCGAATCCCACAAAGGAGCAACTAATTGACATTATTCAG
EST: gi|116395786|gb|EG438378.1|EG438378
EST:     CCAAGTTGGATATGGCTGCATTACTGAGATATTGGCGACATTTTAACCTC                         GTGGATGCTCTTCCGAATCCCACAAAGGAGCAACTAATTGACATTATTCAG
genomic: CCAAGTTGGATATGGCTGCATTACTGAGATATTGGCGACATTTTAACCTCgtgagttcaa ... tttcgtatagGTGGATGCTCTTCCGAATCCCACAAAGGAGCAACTAATTGACATTATTCAG
EST: gi|116395798|gb|EG438390.1|EG438390
EST:     CCAAGTTGGATATGGCTGCATTACTGAGATATTGGCGACATTTTAACCTC                         GTGGATGCTCTTCCGAATCCCACAAAGGAGCAACTAATTGACATTATTCAG
genomic: CCAAGTTGGATATGGCTGCATTACTGAGATATTGGCGACATTTTAACCTCgtgagttcaa ... tttcgtatagGTGGATGCTCTTCCGAATCCCACAAAGGAGCAACTAATTGACATTATTCAG
EST: gi|116395796|gb|EG438388.1|EG438388
EST:     CCAAGTTGGATATGGCTGCATTACTGAGATATTGGCGACATTTTAACCTC                         GTGGATGCTCTTCCGAATCCCACAAAGGAGCAACTAATTGACATTATTCAG
genomic: CCAAGTTGGATATGGCTGCATTACTGAGATATTGGCGACATTTTAACCTCgtgagttcaa ... tttcgtatagGTGGATGCTCTTCCGAATCCCACAAAGGAGCAACTAATTGACATTATTCAG
EST: gi|116395801|gb|EG438393.1|EG438393
EST:     CCAAGTTGGATATGGCTGCATTACTGAGATATTGGCGACATTTTAACCTC                         GTGGATGCTCTTCCGAATCCCACAAAGGAGCAACTAATTGACATTATTCAG
genomic: CCAAGTTGGATATGGCTGCATTACTGAGATATTGGCGACATTTTAACCTCgtgagttcaa ... tttcgtatagGTGGATGCTCTTCCGAATCCCACAAAGGAGCAACTAATTGACATTATTCAG
EST: gi|116395795|gb|EG438387.1|EG438387
EST:     CCAAGTTGGATATGGCTGCATTACTGAGATATTGGCGACATTTTAACCTC                         GTGGATGCTCTTCCGAATCCCACAAAGGAGCAACTAATTGACATTATTCAG
genomic: CCAAGTTGGATATGGCTGCATTACTGAGATATTGGCGACATTTTAACCTCgtgagttcaa ... tttcgtatagGTGGATGCTCTTCCGAATCCCACAAAGGAGCAACTAATTGACATTATTCAG
EST: gi|116395797|gb|EG438389.1|EG438389
EST:     CCAAGTTGGATATGGCTGCATTACTGAGATATTGGCGACATTTTAACCTC                         GTGGATGCTCTTCCGAATCCCACAAAGGAGCAACTAATTGACATTATTCAG
genomic: CCAAGTTGGATATGGCTGCATTACTGAGATATTGGCGACATTTTAACCTCgtgagttcaa ... tttcgtatagGTGGATGCTCTTCCGAATCCCACAAAGGAGCAACTAATTGACATTATTCAG
EST: gi|116395803|gb|EG438395.1|EG438395
EST:     CCAAGTTGGATATGGCTGCATTACTGAGATATTGGCGACATTTTAACCTC                         GTGGATGCTCTTCCGAATCCCACAAAGGAGCAACTAATTGACATTATTCAG
genomic: CCAAGTTGGATATGGCTGCATTACTGAGATATTGGCGACATTTTAACCTCgtgagttcaa ... tttcgtatagGTGGATGCTCTTCCGAATCCCACAAAGGAGCAACTAATTGACATTATTCAG
EST: gi|86076785|gb|DR372542.1|DR372542
EST:     CCAAGTTGGATATGGCTGCATTACTGAGATATTGGCGACATTTTAACCTC                         GTGGATGCTCTTCC
genomic: CCAAGTTGGATATGGCTGCATTACTGAGATATTGGCGACATTTTAACCTCgtgagttcaa ... tttcgtatagGTGGATGCTCTTCC
EST: gi|116395792|gb|EG438384.1|EG438384
EST:     CCAAGTTGGATATGGCTGCATTACTGAGATATTGGCGACATTTTAACCTC                         GTGGATGCTCTTCCGAATCCCACAAAGGAGCAACTAATTGACATTATTCAG
genomic: CCAAGTTGGATATGGCTGCATTACTGAGATATTGGCGACATTTTAACCTCgtgagttcaa ... tttcgtatagGTGGATGCTCTTCCGAATCCCACAAAGGAGCAACTAATTGACATTATTCAG
EST: gi|116395800|gb|EG438392.1|EG438392
EST:     CCAAGTTGGATATGGCTGCATTACTGAGATATTGGCGACATTTTAACCTC                         GTGGATGCTCTTCCGAATCCCCCAAAGGAGCAACTAATTGACATTATTCAG
genomic: CCAAGTTGGATATGGCTGCATTACTGAGATATTGGCGACATTTTAACCTCgtgagttcaa ... tttcgtatagGTGGATGCTCTTCCGAATCCCACAAAGGAGCAACTAATTGACATTATTCAG
EST: gi|116395791|gb|EG438383.1|EG438383
EST:     CCAAGTTGGATATGGCTGCATTACTGAGATATTGGCGACATTTTAACCTC                         GTGGATGCTCTTCCGAATCCCACAAAGGAGCAACTAATTGACATTATTCAG
genomic: CCAAGTTGGATATGGCTGCATTACTGAGATATTGGCGACATTTTAACCTCgtgagttcaa ... tttcgtatagGTGGATGCTCTTCCGAATCCCACAAAGGAGCAACTAATTGACATTATTCAG
EST: gi|116395802|gb|EG438394.1|EG438394
EST:     CCAAGTTGGATATGGCTGCATTACTGAGATATTGGCGACATTTTAACCTC                         GTGGATGCTCTTCCGAATCCCACAAAGGAGCAACTAATTGACATTATTCAG
genomic: CCAAGTTGGATATGGCTGCATTACTGAGATATTGGCGACATTTTAACCTCgtgagttcaa ... tttcgtatagGTGGATGCTCTTCCGAATCCCACAAAGGAGCAACTAATTGACATTATTCAG
EST: gi|116395790|gb|EG438382.1|EG438382
EST:     CCAAGTTGGATATGGCTGCATTACTGAGATATTGGCGACATTTTAACCTC                         GTGGATGCTCTTCCGAATCCCACAAAGGAGCAACTAATTGACATTATTCAG
genomic: CCAAGTTGGATATGGCTGCATTACTGAGATATTGGCGACATTTTAACCTCgtgagttcaa ... tttcgtatagGTGGATGCTCTTCCGAATCCCACAAAGGAGCAACTAATTGACATTATTCAG
EST: gi|116395784|gb|EG438376.1|EG438376
EST:     CCAAGTTGGATATGGCTGCATTACTGAGATATTGGCGACATTTTAACCTC                         GTGGATGCTCTTCCGAATCCCACAAAGGAGCAACTAATTGACATTATTCAG
genomic: CCAAGTTGGATATGGCTGCATTACTGAGATATTGGCGACATTTTAACCTCgtgagttcaa ... tttcgtatagGTGGATGCTCTTCCGAATCCCACAAAGGAGCAACTAATTGACATTATTCAG
EST: gi|116395787|gb|EG438379.1|EG438379
EST:     CCAAGTTGGATATGGCTGCATTACTGAGATATTGGCGACATTTTAACCTC                         GTGGATGCTCTTCCGAATCCCACAAAGGAGCAACTAATTGACATTATTCAG
genomic: CCAAGTTGGATATGGCTGCATTACTGAGATATTGGCGACATTTTAACCTCgtgagttcaa ... tttcgtatagGTGGATGCTCTTCCGAATCCCACAAAGGAGCAACTAATTGACATTATTCAG