1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
ATCAGAAGTGAGCTTGATGAGAGAATGCCAAGCATTAAACCAACGgtgagaaatagatattggcactgtgagattgtaagcattagtttgtttactgatttttgtttctgttag
species | Arabidopsis thaliana |
transcript | AT1G10640.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TGAGAGAATGCCAAGTCATTAAACCAACG GCATTGAGATTCTCTGGGAGTTTTGGTGTGGAAGTGACGGGTATAACGATAEST: gi|86060241|gb|DR355998.1|DR355998
genomic: TGAGAGAATGCCAAG-CATTAAACCAACGgtgagaaata ... tttctgttagGCATTGAGATTCTCTGGGAGTTTTGGTGTGGAAGTGACGGGTATAACGATA
EST: ATCAGAAGTGAGCTTGATGAGAGAATGCCAAGCATTAAACCAACG GCATTGAGATTCTCTGGGAGTTTTGGTGTGGAAGTGACGGGTATAACGATAEST: gi|164157728|gb|EL984497.1|EL984497
genomic: ATCAGAAGTGAGCTTGATGAGAGAATGCCAAGCATTAAACCAACGgtgagaaata ... tttctgttagGCATTGAGATTCTCTGGGAGTTTTGGTGTGGAAGTGACGGGTATAACGATA
EST: AGAAGTGAGCTTGATGAGAGAATGCCAAGCATTAAACCAACG GCATTGAGATTCTCTGGGAGTTTTGGTGTGGAAGTGACGGGTATAACGATA
genomic: AGAAGTGAGCTTGATGAGAGAATGCCAAGCATTAAACCAACGgtgagaaata ... tttctgttagGCATTGAGATTCTCTGGGAGTTTTGGTGTGGAAGTGACGGGTATAACGATA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATCAGAAGTGAGCTTGATGAGAGAATGCCAAGCATTAAACCAACGgtgagaaatagatattggcactgtgagattgtaagcattagtttgtttactgatttttgtttctgttag
- AGAAGT
- - - - GAGCTT