1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GTTATTCCTCTTCATAACCATCCAGGGATGACAGTTTTTAGTAAGCTTCTCTTTGGTACAATGCACATCAAGTCATATGATTGGGTGGTTGATGCTCCAAgtaagtttactttcgtcccaagaaaacttttgtgagctctgaaacttgtttgtcgttgttaccttgcagtgatttctggttggcttattagggttcatta...
species | Arabidopsis thaliana |
transcript | AT5G15120.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: ATGATTGGGTGGTTGATGCTCCAA TGAGAGATTC-AAAACCAGGCTAGCGAAATTGAAGGTGGATTCAACATTCAEST: gi|164147836|gb|ES203986.1|ES203986
genomic: ATGATTGGGTGGTTGATGCTCCAAgtaagtttac ... tcaaatgcagTGAGAGATTCAAAAACCAGGCTAGCGAAATTGAAGGTGGATTCAACATTCA
EST: ATGATTGGGTGGTTGATGCTCCAA TGAGAGATTCAAAAACCAGGCTAGCGAAATTGAAGGTGGATTCAACATTCAEST: gi|164199939|gb|ES210064.1|ES210064
genomic: ATGATTGGGTGGTTGATGCTCCAAgtaagtttac ... tcaaatgcagTGAGAGATTCAAAAACCAGGCTAGCGAAATTGAAGGTGGATTCAACATTCA
EST: GTACAATGCACATCAAGTCATATGATTGGGTGGTTGATGCTCCAA TGAGAGATTCAAAAACCAGGCTAGCGAAATTGAAGGTGGATTCAACATTCEST: gi|116471642|gb|EG514234.1|EG514234
genomic: GTACAATGCACATCAAGTCATATGATTGGGTGGTTGATGCTCCAAgtaagtttac ... tcaaatgcagTGAGAGATTCAAAAACCAGGCTAGCGAAATTGAAGGTGGATTCAACATTC
EST: CTTTGGTACAATGCACATCAAGTCATATGATTGGGTGGTTGATGCTCCAA TGAGAGATTCAAAAACCAGGCTAGCGAAATTGAAGGTGGATTCAACATTCA
genomic: CTTTGGTACAATGCACATCAAGTCATATGATTGGGTGGTTGATGCTCCAAgtaagtttac ... tcaaatgcagTGAGAGATTCAAAAACCAGGCTAGCGAAATTGAAGGTGGATTCAACATTCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTATTCCTCTTCATAACCATCCAGGGATGACAGTTTTTAGTAAGCTTCTCTTTGGTACAATGCACATCAAGTCATATGATTGGGTGGTTGATGCTCCAAgtaagtttactttcgtcccaagaaaacttttgtgagctctgaaacttgtttgtcgttgttaccttgcagtgatttctggttggcttattagggttcatta
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