Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTGATGCTGATGTCAAACCTTCTGGAGAGACTGCAATCTCTGTTGATGGAAAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaaaaaccacttatgtgatcagtctttttatctcaagtctagaataagcatttgaattggatatggttggtatcttag

Basic information

species Arabidopsis thaliana
transcript AT3G26650.1
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|125213507|gb|EL228339.1|EL228339
EST:     AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCA
genomic: AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCA
EST: gi|124930333|gb|EL007793.1|EL007793
EST:     AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTG
genomic: AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTG
EST: gi|116461866|gb|EG504458.1|EG504458
EST:     AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
genomic: AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
EST: gi|124832251|gb|EH916690.1|EH916690
EST:     AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATT
genomic: AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATT
EST: gi|125215599|gb|EL229683.1|EL229683
EST:     AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCATCG
genomic: AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCG
EST: gi|125044908|gb|EL117177.1|EL117177
EST:     TCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
genomic: TCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
EST: gi|125316264|gb|EL330349.1|EL330349
EST:     ACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
genomic: ACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
EST: gi|125143574|gb|EL179981.1|EL179981
EST:     CTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
genomic: CTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
EST: gi|125028990|gb|EL101259.1|EL101259
EST:     AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGAC
genomic: AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGAC
EST: gi|124881418|gb|EH960320.1|EH960320
EST:     TTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
genomic: TTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
EST: gi|124776424|gb|EH866551.1|EH866551
EST:     AGATCATCCAAGTTGTCTCTAACCGAAACCCGTTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
genomic: AGATCATCCAAGTTGTCTCTAACCGAAACCCG-TCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
EST: gi|124923551|gb|EL001735.1|EL001735
EST:     AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCATACGAAAGGAACCGGAGTGTTTGTGGAT
genomic: AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCAT-CGAA-GGAACCGGAGTGTTTGTGGAT
EST: gi|125010145|gb|EL082414.1|EL082414
EST:     AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGGAGCTAGGAATTGACATTGTCATCGAAGGAACCGG
genomic: AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGG-AGCTAGGAATTGACATTGTCATCGAAGGAACCGG
EST: gi|124810666|gb|EH895532.1|EH895532
EST:     CTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
genomic: CTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
EST: gi|125126939|gb|EL172006.1|EL172006
EST:     AACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGT
genomic: AACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGT
EST: gi|125260972|gb|EL275057.1|EL275057
EST:     ATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
genomic: ATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
EST: gi|124866845|gb|EH951282.1|EH951282
EST:     AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTG
genomic: AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTG
EST: gi|116475945|gb|EG518537.1|EG518537
EST:     AAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGCCATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
genomic: AAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
EST: gi|125113776|gb|EL164472.1|EL164472
EST:     AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCA
genomic: AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCA
EST: gi|125300560|gb|EL314645.1|EL314645
EST:     AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAG
genomic: AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAG
EST: gi|125103641|gb|EL157979.1|EL157979
EST:     TCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
genomic: TCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
EST: gi|124926460|gb|EL004294.1|EL004294
EST:     TCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTACATCGAAGGAACCGGAGTGTTTGTGGATA
genomic: TCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGT-CATCGAAGGAACCGGAGTGTTTGTGGATA
EST: gi|124999870|gb|EL072139.1|EL072139
EST:     AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCATCG
genomic: AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCG
EST: gi|124734809|gb|EH826211.1|EH826211
EST:     CATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
genomic: CATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
EST: gi|125210055|gb|EL225009.1|EL225009
EST:     TTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTG
genomic: TTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTG
EST: gi|124967158|gb|EL041212.1|EL041212
EST:     AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACA
genomic: AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACA
EST: gi|125257017|gb|EL271102.1|EL271102
EST:     AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTG
genomic: AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTG
EST: gi|124956697|gb|EL031594.1|EL031594
EST:     AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCATCGAAGGAAC
genomic: AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCGAAGGAAC
EST: gi|124726665|gb|EH818067.1|EH818067
EST:     ACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGTAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATA
genomic: ACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGG-AATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATA
EST: gi|124886082|gb|EH964984.1|EH964984
EST:     TGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
genomic: TGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
EST: gi|125186244|gb|EL201198.1|EL201198
EST:     AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTG
genomic: AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTG
EST: gi|116448001|gb|EG490593.1|EG490593
EST:     AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
genomic: AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
EST: gi|47829324|gb|CK119008.1|CK119008
EST:     AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
genomic: AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
EST: gi|124914914|gb|EH988788.1|EH988788
EST:     CTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
genomic: CTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
EST: gi|125292309|gb|EL306394.1|EL306394
EST:     TTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
genomic: TTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
EST: gi|124838078|gb|EH922517.1|EH922517
EST:     AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTC
genomic: AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTC
EST: gi|125196606|gb|EL211560.1|EL211560
EST:     AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCATCGAAGGAACC
genomic: AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCGAAGGAACC
EST: gi|124704788|gb|EH796190.1|EH796190
EST:     AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCATAACGAAGGAACCGGAGTGTTTGTGGAT
genomic: AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCAT--CGAAGGAACCGGAGTGTTTGTGGAT
EST: gi|125029269|gb|EL101538.1|EL101538
EST:     CCGAAACCCGTCTCTTCT-CCTTGGAA                         GGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
genomic: CCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
EST: gi|124839672|gb|EH924111.1|EH924111
EST:     AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGACTAGGAATTGACATTGTCATCGAAGGAACC
genomic: AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAG-CTAGGAATTGACATTGTCATCGAAGGAACC
EST: gi|124964394|gb|EL038661.1|EL038661
EST:     TTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
genomic: TTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
EST: gi|116448000|gb|EG490592.1|EG490592
EST:     AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
genomic: AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
EST: gi|125264628|gb|EL278713.1|EL278713
EST:     CATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCATCGAAGGAACCGG
genomic: CATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCGAAGGAACCGG
EST: gi|125039182|gb|EL111451.1|EL111451
EST:     CCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
genomic: CCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
EST: gi|164096478|gb|ES210867.1|ES210867
EST:     ATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCAAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
genomic: ATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
EST: gi|125203231|gb|EL218185.1|EL218185
EST:     ATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
genomic: ATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
EST: gi|124761106|gb|EH851236.1|EH851236
EST:     TCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
genomic: TCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
EST: gi|163969880|gb|ES059204.1|ES059204
EST:     AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTTGTGGA
genomic: AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTT-GTGGA
EST: gi|125208537|gb|EL223491.1|EL223491
EST:     AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
genomic: AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
EST: gi|124975396|gb|EL048897.1|EL048897
EST:     AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGT
genomic: AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGT
EST: gi|125042383|gb|EL114652.1|EL114652
EST:     CATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACACTGTCATCGAAGGAACCGG
genomic: CATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCGAAGGAACCGG
EST: gi|124947844|gb|EL023651.1|EL023651
EST:     GTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
genomic: GTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
EST: gi|125217481|gb|EL231564.1|EL231564
EST:     TCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
genomic: TCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
EST: gi|124846479|gb|EH930916.1|EH930916
EST:     TCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
genomic: TCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
EST: gi|125309527|gb|EL323612.1|EL323612
EST:     ATCCAAGTTGTCTCTAACCGAAACCCATCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
genomic: ATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
EST: gi|124995014|gb|EL067283.1|EL067283
EST:     CTCTTNTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
genomic: CTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
EST: gi|125311640|gb|EL325725.1|EL325725
EST:     CTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
genomic: CTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
EST: gi|124862467|gb|EH946904.1|EH946904
EST:     TTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
genomic: TTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
EST: gi|124912821|gb|EH986808.1|EH986808
EST:     AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACA
genomic: AAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACA
EST: gi|124780284|gb|EH870227.1|EH870227
EST:     TCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
genomic: TCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
EST: gi|125061408|gb|EL130047.1|EL130047
EST:     CTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
genomic: CTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
EST: gi|125284728|gb|EL298813.1|EL298813
EST:     TCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
genomic: TCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCGAAGGAACCGGAGTGTTTGTGGATAG
EST: gi|125195226|gb|EL210180.1|EL210180
EST:     CCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAA                         GGAGCTAGGAATTGACATTGTCATCGAAGGAA
genomic: CCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaa ... ggtatcttagGGAGCTAGGAATTGACATTGTCATCGAAGGAA

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
TTGATGCTGATGTCAAACCTTCTGGAGAGACTGCAATCTCTGTTGATGGAAAGATCATCCAAGTTGTCTCTAACCGAAACCCGTCTCTTCTCCCTTGGAAgtaagtcgaaaaaccacttatgtgatcagtctttttatctcaagtctagaataagcatttgaattggatatggttggtatcttag

- - - - - - - - - - - - - - - - - - - - - - - - -  AGATCA