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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCAGTGGTACTTTTTGCTATGGGTGGCTATGGAACATACCTAGGCTTCCGGATTCGTTATTCTGATGACATTgtaagactatttacccaaataatctgactatagtagtacaagaagcgttgttgtttaaactgttttcttcatttgccttgaaattttcag

Basic information

species Arabidopsis thaliana
transcript AT2G36885.2
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|86016138|gb|DR311884.1|DR311884
EST:     GTGGCTATGGAACATACCTAGGCTTCCGGATTCGTTATTCTGATGACATT                         GAGGAGAAGGCAAAGGCAAAAGACCTGCACCCAAAGCTTCTAGCCGGAATG
genomic: GTGGCTATGGAACATACCTAGGCTTCCGGATTCGTTATTCTGATGACATTgtaagactat ... aaattttcagGAGGAGAAGGCAAAGGCAAAAGACCTGCACCCAAAGCTTCTAGCCGGAATG
EST: gi|86078685|gb|DR374442.1|DR374442
EST:     GTGGCTATGGAACATACCTAGGCTTCCGGATTCGTTATTCTGATGACATT                         GAGGAGAAGGCAAAGGCAAAAGACCTGCACCCAAAGCTTCTAGCCGGAATG
genomic: GTGGCTATGGAACATACCTAGGCTTCCGGATTCGTTATTCTGATGACATTgtaagactat ... aaattttcagGAGGAGAAGGCAAAGGCAAAAGACCTGCACCCAAAGCTTCTAGCCGGAATG
EST: gi|124739682|gb|EH830844.1|EH830844
EST:     GTGGCTATGGAACATACCTAGGCTTCCGGATTCGTTATTCTGATGACATT                         GAGGAGAAGGCAAAGGCAAAAGACCTGCAC
genomic: GTGGCTATGGAACATACCTAGGCTTCCGGATTCGTTATTCTGATGACATTgtaagactat ... aaattttcagGAGGAGAAGGCAAAGGCAAAAGACCTGCAC