1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GAAGAGGAGTGGTCGTAATCTAACATATATATTAAATACACATCATCATTATGATCACACTGGTGGGAATTTGGAATTAAAAGACAGGTACGGGGCAAAGgtaggatgttttaacttctctttatgtactcgttgtgcaatgataacatttaaaaagaatgttggtataaacgaaggttacatctttggtatgcag
species | Arabidopsis thaliana |
transcript | AT2G31350.2 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: ATGATCACACTGGTGGGAATTTGGAATTAAAAGACAGGTACGGGGCAAAG GTGATTGGCTCAGCTATGGATAAAGACCGGATTCCTGGAATTGEST: gi|125093940|gb|EL151479.1|EL151479
genomic: ATGATCACACTGGTGGGAATTTGGAATTAAAAGACAGGTACGGGGCAAAGgtaggatgtt ... tggtatgcagGTGATTGGCTCAGCTATGGATAAAGACCGGATTCCTGGAATTG
EST: ATGATCACACTGGTGGGAATTTGGAATTAAAAGACAGGTACGGGGCAAAG GTGATTGGCTCAGCTATGGEST: gi|124740744|gb|EH831906.1|EH831906
genomic: ATGATCACACTGGTGGGAATTTGGAATTAAAAGACAGGTACGGGGCAAAGgtaggatgtt ... tggtatgcagGTGATTGGCTCAGCTATGG
EST: ATGATCACACTGGTGGGAATTTGGAATTAAAAGACAGGTACGGGGCAAAG GTGATTGGCTCAGCTATGGATAAAGACCGGATTCC
genomic: ATGATCACACTGGTGGGAATTTGGAATTAAAAGACAGGTACGGGGCAAAGgtaggatgtt ... tggtatgcagGTGATTGGCTCAGCTATGGATAAAGACCGGATTCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAAGAGGAGTGGTCGTAATCTAACATATATATTAAATACACATCATCATTATGATCACACTGGTGGGAATTTGGAATTAAAAGACAGGTACGGGGCAAAGgtaggatgttttaacttctctttatgtactcgttgtgcaatgataacatttaaaaagaatgttggtataaacgaaggttacatctttggtatgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG