1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
ACCTTATTTTGCACTGTGGAATCCTCCTTCTCCTCCTGTTTCAGAGACTGAGCTGAGACAATGGCCTTTGAATGTTCTGGAATCAAAAGTAACTGCTGGGgtaagagattatctctctcactctcactcttttgaaatcttgatttgttatcactggacttacaagttaaagaaaattgtctcttgccttttggtctttggttgttgttggattatgaatcag
species | Arabidopsis thaliana |
transcript | AT2G04360.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GTTCTGGAATCAAAAGTAACTGCTGGG GTCACTCTAGTTGCAGGACTGGGTATAATTCTTTATTCAGTTGTCGGTAATEST: gi|116416787|gb|EG459379.1|EG459379
genomic: GTTCTGGAATCAAAAGTAACTGCTGGGgtaagagatt ... tatgaatcagGTCACTCTAGTTGCAGGACTGGGTATAATTCTTTATTCAGTTGTCGGTAAT
EST: AGCTGAGACAATGGCCTTTGAATGTTCTGGAATCAAAAGTAACTGCTGGG GTCACTCTAGTTGCAGGACTGGGTATAATTCTTTATTCAGTTGTCGGTAAT
genomic: AGCTGAGACAATGGCCTTTGAATGTTCTGGAATCAAAAGTAACTGCTGGGgtaagagatt ... tatgaatcagGTCACTCTAGTTGCAGGACTGGGTATAATTCTTTATTCAGTTGTCGGTAAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACCTTATTTTGCACTGTGGAATCCTCCTTCTCCTCCTGTTTCAGAGACTGAGCTGAGACAATGGCCTTTGAATGTTCTGGAATCAAAAGTAACTGCTGGGgtaagagattatctctctcactctcactcttttgaaatcttgatttgttatcactggacttacaagttaaagaaaattgtctcttgccttttggtctttggttgttgttggattatgaatcag
- - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA