1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
ATGATTATCCTCCATACCTTACAGGAGAACTTCCAGGGGATTATGGTTTCGACATTGCAGGACTTGGCAAAGATCGTTTGACCTTTGATAAGTATTTCAAgtgagtcttctcctttctatttctaaccttagcttgttctgtaattagaggctgtcctgattcttctaactaactgttgactgttgttgtttctcatgat...
species | Arabidopsis thaliana |
transcript | AT1G76570.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TTGCAGGACTTGGCAAAGATCGTTTGACCTTTGATAAGTATTTCAA CTTTGAAATACTTCATGCTCGTTGGGCCATGCTTGCAGCATTGGGTGCTCTEST: gi|163973076|gb|ES105846.1|ES105846
genomic: TTGCAGGACTTGGCAAAGATCGTTTGACCTTTGATAAGTATTTCAAgtgagtcttc ... tgttttgcagCTTTGAAATACTTCATGCTCGTTGGGCCATGCTTGCAGCATTGGGTGCTCT
EST: AGGACTTGGCAAAGATCGTTTGACCTTTGATAAGTATTTCAA CTTTGAAATACTTCATGCTCGTTGGGCCATGCTTGCNGCATTGGGTGCTCT
genomic: AGGACTTGGCAAAGATCGTTTGACCTTTGATAAGTATTTCAAgtgagtcttc ... tgttttgcagCTTTGAAATACTTCATGCTCGTTGGGCCATGCTTGCAGCATTGGGTGCTCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGATTATCCTCCATACCTTACAGGAGAACTTCCAGGGGATTATGGTTTCGACATTGCAGGACTTGGCAAAGATCGTTTGACCTTTGATAAGTATTTCAAgtgagtcttctcctttctatttctaaccttagcttgttctgtaattagaggctgtcctgattcttctaactaactgttgactgttgttgtttctcatgat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctcctttc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ccttagct