1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
CTTGCAAGGCTAGAGGATCCGATCTTAGGGTTCACTTCAAGgtatgtatagctctgtcaattgtcattttgattattcgatgtagttagatttatgattaggagattgtagttttaggttaaacctgattgagaaaaagca...
species | Arabidopsis thaliana |
transcript | AT1G67430.2 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: CTTGCAAGGCTAGAGGATCCGATCTTAGGGTTCACTTCAAG AATACTAGGGAAACAGCGCACGCAATCAGGAAGCTACCATTGATCAAGGCGEST: gi|164016047|gb|EL985745.1|EL985745
genomic: CTTGCAAGGCTAGAGGATCCGATCTTAGGGTTCACTTCAAGgtatgtatag ... tgtgaaacagAATACTAGGGAAACAGCGCACGCAATCAGGAAGCTACCATTGATCAAGGCG
EST: GGATCCGATCTTAGGGTTCACTTCAAG AACACTAGGGAAACAGCGCACGCCATCAGGAAGCTACCATTGATCAAGGCGEST: gi|124706571|gb|EH797973.1|EH797973
genomic: GGATCCGATCTTAGGGTTCACTTCAAGgtatgtatag ... tgtgaaacagAATACTAGGGAAACAGCGCACGCAATCAGGAAGCTACCATTGATCAAGGCG
EST: TAGGGTTCACTTCAAG AATACTAGGGAAACAGCGCACGCAATCAGGAAGCTACCATTGATCAAGGCG
genomic: TAGGGTTCACTTCAAGgtatgtatag ... tgtgaaacagAATACTAGGGAAACAGCGCACGCAATCAGGAAGCTACCATTGATCAAGGCG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTTGCAAGGCTAGAGGATCCGATCTTAGGGTTCACTTCAAGgtatgtatagctctgtcaattgtcattttgattattcgatgtagttagatttatgattaggagattgtagttttaggttaaacctgattgagaaaaagca
- - - - - AGAGGA
- - - - - - GAGGAT