1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
AGTTGGTGAGAGCGTGGCGAAACCACTTCTGTATTATAACAATAACTTGATTGCGACTATTACACTTTTGGAAGTAATGGCTGCACACGGATGTAAAAAGgtaaaatccccttttggtctgtattgcagatttttggtattccttatgtatgtgagtatgtgacagtgaaacatgatttaactttctctcattgatctcaatcag
species | Arabidopsis thaliana |
transcript | AT1G64440.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TTGCGACTATTACACTTTTGGAAGTAATGGCTGCACACGGATGTAAAAAG CTTGTATTTTCTTCGTCCGCTACTGTGTATEST: gi|86052920|gb|DR348677.1|DR348677
genomic: TTGCGACTATTACACTTTTGGAAGTAATGGCTGCACACGGATGTAAAAAGgtaaaatccc ... tctcaatcagCTTGTATTTTCTTCGTCCGCTACTGTGTAT
EST: TTGCGACTATTACACTTTTGGAAGTAATGGCTGCACACGGATGTAAAAAG CTTGTATTTTCTTCGEST: gi|86052922|gb|DR348679.1|DR348679
genomic: TTGCGACTATTACACTTTTGGAAGTAATGGCTGCACACGGATGTAAAAAGgtaaaatccc ... tctcaatcagCTTGTATTTTCTTCG
EST: TTGCGACTATTACACTTTTGGAAGTAATGGCTGCACACGGATGTAAAAAG CTTGTATTTTCTTCGTCCGCTACTGTGTATGGCTGG
genomic: TTGCGACTATTACACTTTTGGAAGTAATGGCTGCACACGGATGTAAAAAGgtaaaatccc ... tctcaatcagCTTGTATTTTCTTCGTCCGCTACTGTGTATGGCTGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGTTGGTGAGAGCGTGGCGAAACCACTTCTGTATTATAACAATAACTTGATTGCGACTATTACACTTTTGGAAGTAATGGCTGCACACGGATGTAAAAAGgtaaaatccccttttggtctgtattgcagatttttggtattccttatgtatgtgagtatgtgacagtgaaacatgatttaactttctctcattgatctcaatcag
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