1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
TTTCCTGTAGCTGTTACATTCCTCATCACTTGGTGGTTTATCCAGTTCGTTGATGGTTTCTTCAGTCCGATATACGAGAACCTTGGTGTTGACATATTTGgtatgaattgaaattcttctgacttgtatcgtaatgttatgtactaagtaaaacttgatgtagaaacttcgtctatgaagtctaagatatcttaatagat...
species | Arabidopsis thaliana |
transcript | AT1G43130.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TGACATATTTG GACTTGGGTTCATTACANCTGTACTTTTCACTTTCTTTGTCGGAATATTTGEST: gi|124969162|gb|EL043083.1|EL043083
genomic: TGACATATTTGgtatgaattg ... tatgttgcagGACTTGGGTTCATTACATCTGTACTTTTCACTTTCTTTGTCGGAATATTTG
EST: TGACATATTTG GACTTGGGTTCATTACATCTGTACTTTTCACTTTCTTTGTCGGAATATTTGEST: gi|164001381|gb|ES188545.1|ES188545
genomic: TGACATATTTGgtatgaattg ... tatgttgcagGACTTGGGTTCATTACATCTGTACTTTTCACTTTCTTTGTCGGAATATTTG
EST: GGTGTTGACATATTTG GACTTGGGTTCATTACATCTGTACTTTTCACTTTCTTTGTCGGAATATTTGEST: gi|116447062|gb|EG489654.1|EG489654
genomic: GGTGTTGACATATTTGgtatgaattg ... tatgttgcagGACTTGGGTTCATTACATCTGTACTTTTCACTTTCTTTGTCGGAATATTTG
EST: TGATGGTTTCTTCAGTCCGATATACGAGAACCTTGGTGTTGACATATTTG GACTTGGGTTCATTACATCTGTACTTTTCACTTTCTTTGTCGGAATATTTG
genomic: TGATGGTTTCTTCAGTCCGATATACGAGAACCTTGGTGTTGACATATTTGgtatgaattg ... tatgttgcagGACTTGGGTTCATTACATCTGTACTTTTCACTTTCTTTGTCGGAATATTTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTTCCTGTAGCTGTTACATTCCTCATCACTTGGTGGTTTATCCAGTTCGTTGATGGTTTCTTCAGTCCGATATACGAGAACCTTGGTGTTGACATATTTGgtatgaattgaaattcttctgacttgtatcgtaatgttatgtactaagtaaaacttgatgtagaaacttcgtctatgaagtctaagatatcttaatagat
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