1 5' 3' | 2 5' 3' | 3 5' 3' |
GGTGAAATTCTACCATGTTTTTGCTAAAGAGTTGGAGCCTCATAAGCCTCTTACAAAGTTCATGTGCGTCAAAGGGATAGTGTTCTTCTGCTTTTGGCAGgtaaatacttaatttccaactttttctttgcctgccaaatgccaaaatcacaagttctctgcctactagtttcttcaatcaactaactgagtttgatgag...
species | Arabidopsis thaliana |
transcript | AT1G11200.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TTACAAAGTTCATGTGCGTCAAAGGGATAGTGTTCTTCTGCTTTTGGCAG GGAATAGTCCTGAAGATATTGGTGGGATTGGGATTAATTAAGTCGCATCATEST: gi|125007315|gb|EL079584.1|EL079584
genomic: TTACAAAGTTCATGTGCGTCAAAGGGATAGTGTTCTTCTGCTTTTGGCAGgtaaatactt ... tgttgcacagGGAATAGTCCTGAAGATATTGGTGGGATTGGGATTAATTAAGTCGCATCAT
EST: CAAAGTTCATGTGCGTCAAAGGGATAGTGTTCTTCTGCTTTTGGCAG GGAATAGTCCTGAAGATATTGGTGGGATTGGGATTAATTAAGTCGCATCAT
genomic: CAAAGTTCATGTGCGTCAAAGGGATAGTGTTCTTCTGCTTTTGGCAGgtaaatactt ... tgttgcacagGGAATAGTCCTGAAGATATTGGTGGGATTGGGATTAATTAAGTCGCATCAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGTGAAATTCTACCATGTTTTTGCTAAAGAGTTGGAGCCTCATAAGCCTCTTACAAAGTTCATGTGCGTCAAAGGGATAGTGTTCTTCTGCTTTTGGCAGgtaaatacttaatttccaactttttctttgcctgccaaatgccaaaatcacaagttctctgcctactagtttcttcaatcaactaactgagtttgatgag
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