Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|116396841|gb|EG439433.1|EG439433EST: CTCGTCTCATCCGAGAAGCAGTTCCAAACAATCGAGAGGCTTTTTGAACG GCTTGTTGCAAAGACAACGCAGTTGGAAAGCGAGAAAGTGCAGAAAGAAGC
genomic: CTCGTCTCATCCGAGAAGCAGTTCCAAACAATCGAGAGGCTTTTTGAACGgtgtgttcta ... gatgaaacagGCTTGTTGCAAAGACAACGCAGTTGGAAAGCGAGAAAGTGCAGAAAGAAGC
EST:
gi|86076002|gb|DR371759.1|DR371759EST: CTCGTCTCATCCGAGAAGCAGTTCCAAACAATCGAGAGGCTTTTTGAACG GCTTGTTGCAAAGACAACGCAGTTGGAAAGCAAGAAAGTGCAGAAAGAAGC
genomic: CTCGTCTCATCCGAGAAGCAGTTCCAAACAATCGAGAGGCTTTTTGAACGgtgtgttcta ... gatgaaacagGCTTGTTGCAAAGACAACGCAGTTGGAAAGCGAGAAAGTGCAGAAAGAAGC
EST:
gi|86080753|gb|DR376510.1|DR376510EST: CTCGTCTCATCCGAGAAGCAGTTCCAAACAATCGAGAGGCTTTTTGAACG GCTTGTTGCAAAGACAACGCAGTTGGAAAGCGAGAAAGTGCAGAAAGAAGC
genomic: CTCGTCTCATCCGAGAAGCAGTTCCAAACAATCGAGAGGCTTTTTGAACGgtgtgttcta ... gatgaaacagGCTTGTTGCAAAGACAACGCAGTTGGAAAGCGAGAAAGTGCAGAAAGAAGC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TTGAGTCTCTTAAATCGTATGTTACAAGTCTCATTAGCGTCAGAGAAACTCTCGTCTCATCCGAGAAGCAGTTCCAAACAATCGAGAGGCTTTTTGAACGgtgtgttctatgcactttccatattttctgaaaaagcatatcttgtgtacttcttccttgcctgtttaactcattgtgtaggctctactctctagaataa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGAGG