Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|116421531|gb|EG464123.1|EG464123EST: AATCCTCTGGCCAAGAAACTATTAAACTCGCTATCCGTGCTCTGCTTGAG GTAGTTGAGAGTGGCGGAAAGAACATTGAGGTTGCCGTAATGACACGGGAG
genomic: AATCCTCTGGCCAAGAAACTATTAAACTCGCTATCCGTGCTCTGCTTGAGgttggtgccc ... tgcattgcagGTAGTTGAGAGTGGCGGAAAGAACATTGAGGTTGCCGTAATGACACGGGAG
EST:
gi|125245845|gb|EL259930.1|EL259930EST: AATCCTCTGGCCAAGAAACTATTAAACTCGCTATCCGTGCTCTGCTTGAG GTAGTTGAGAGTGGCGGAAAGAACATTGAGGTTGC
genomic: AATCCTCTGGCCAAGAAACTATTAAACTCGCTATCCGTGCTCTGCTTGAGgttggtgccc ... tgcattgcagGTAGTTGAGAGTGGCGGAAAGAACATTGAGGTTGC
EST:
gi|19874668|gb|AU235499.1|AU235499EST: AATCCTCTGGCCAAGAAACTATTAAACTCGCTATCCGTGCTCTGCTTGAG GTAGTTGAGAGTGGCGGAAAGAACATTGAGGTTGCCGTAATGACACGGGAG
genomic: AATCCTCTGGCCAAGAAACTATTAAACTCGCTATCCGTGCTCTGCTTGAGgttggtgccc ... tgcattgcagGTAGTTGAGAGTGGCGGAAAGAACATTGAGGTTGCCGTAATGACACGGGAG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CGGCAGAAACTCCAACTCTATTAGGGAATTCCTCGAGAAGAACTACAAAGAATCCTCTGGCCAAGAAACTATTAAACTCGCTATCCGTGCTCTGCTTGAGgttggtgccctctccgtcctagctgatattttgttatttcaggattttttgtcctttgagatcatagctgttttgatatcggctttgcattgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA