Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|116456362|gb|EG498954.1|EG498954EST: ACTCTCAGGCAACGCCAGCCGGGGAAACATTTTTCTGAGCAAGCGGTAAA ATTTTACATAGCAGAGTCATTGTTAGCTTTGGAATACCTGCACATGCTTGG
genomic: ACTCTCAGGCAACGCCAGCCGGGGAAACATTTTTCTGAGCAAGCGGTAAAgtgagtcatt ... tgtgtggcagATTTTACATAGCAGAGTCATTGTTAGCTTTGGAATACCTGCACATGCTTGG
EST:
gi|164170254|gb|ES036303.1|ES036303EST: CAGGCAACGCCAGCCGGGGAAACATTTTTCTGAGCAAGCGGTAAA ATTTTACATAGCAGAGTCATTGCTAGC
genomic: CAGGCAACGCCAGCCGGGGAAACATTTTTCTGAGCAAGCGGTAAAgtgagtcatt ... tgtgtggcagATTTTACATAGCAGAGTCATTGTTAGC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
AGAAATTCTCATGCCTGGTGATGGAATTCTGTCCCGGAGGAGATTTGCATACTCTCAGGCAACGCCAGCCGGGGAAACATTTTTCTGAGCAAGCGGTAAAgtgagtcatttttccttcgtctgtcaagattagcatttcctttgattttatcgtatttcaaagtattgggtagatgacaaaagacatactcatttcggctgaagcagagcattcttattctcatctcactaaagattttgttttcaatgtgtggcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG