Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|47830360|gb|CK120044.1|CK120044EST: ACAAGTGGATTCCTTGTGTTGAATTCGAGTTAGAG--------CAC---- ---GGATTTGTGTACCGTGAGCACGGAAACACTCCCGGATACTACGATGGA
genomic: ACAAGTGGATTCCTTGTGTTGAATTCGAGTTAGAGGTAATAAACACAAAAgttttctttt ... gtgtttatagCACGGATTTGTGTACCGTGAGCACGGAAACACTCCCGGATACTACGATGGA
EST:
gi|47828371|gb|CK118055.1|CK118055EST: ACAAGTGGATTCCTTGTGTTGAATTCGAGTTAGAG--------CAC---- ---GGATTTGTGTACCGTGAGCACGGAAACACTCCCGGATACTACGATGGA
genomic: ACAAGTGGATTCCTTGTGTTGAATTCGAGTTAGAGGTAATAAACACAAAAgttttctttt ... gtgtttatagCACGGATTTGTGTACCGTGAGCACGGAAACACTCCCGGATACTACGATGGA
EST:
gi|47831548|gb|CK121232.1|CK121232EST: ACAAGTGGATTCCTTGTGTTGAATTCGAGTTAGAG--------CAC---- ---GGATTTGTGTACCGTGAGCACGGAAACACTCCCGGATACTACGATGGA
genomic: ACAAGTGGATTCCTTGTGTTGAATTCGAGTTAGAGGTAATAAACACAAAAgttttctttt ... gtgtttatagCACGGATTTGTGTACCGTGAGCACGGAAACACTCCCGGATACTACGATGGA
EST:
gi|47828260|gb|CK117944.1|CK117944EST: ACAAGTGGATTCCTTGTGTTGAATTCGAGTTAGAG--------CAC---- ---GGATTTGTGTACCGTGAGCACGGAAACACTCCCGGATACTACGATGGA
genomic: ACAAGTGGATTCCTTGTGTTGAATTCGAGTTAGAGGTAATAAACACAAAAgttttctttt ... gtgtttatagCACGGATTTGTGTACCGTGAGCACGGAAACACTCCCGGATACTACGATGGA
EST:
gi|47831371|gb|CK121055.1|CK121055EST: ACAAGTGGATTCCTTGTGTTGAATTCGAGTTAGAG--------CAC---- ---GGATTTGTGTACCGTGAGCACGGAAACACTCCCGGATACTACGATGGA
genomic: ACAAGTGGATTCCTTGTGTTGAATTCGAGTTAGAGGTAATAAACACAAAAgttttctttt ... gtgtttatagCACGGATTTGTGTACCGTGAGCACGGAAACACTCCCGGATACTACGATGGA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TGACCTTAGTGACGTCGAATTGGCTAAGGAAGTTGACTACCTTCTCCGCAACAAGTGGATTCCTTGTGTTGAATTCGAGTTAGAGGTAATAAACACAAAAgttttcttttgtctactaatcattattatttattcgttttcattgctagaaatattagcctataaccggattttgtagaaccgaaatagactatatcaccttgtgcatatcctccaatatcaattgtattgaatggttttcttatgtgtttatag
- - - - - - - - - - - - - - - - - - - - - - - - - - AGTGGA