1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
TTGCTCTCGCAAGATTAGGTTCTCAATCCATCTGTGACCGGCCTTTGAATGTGGCAATGGCTGGCAGTATTGGAGGTGACCCTCTCGGTAGCTTTTACGGgtactaaactgtcttacttatatggcccttctctttttttttggctaattgtgtatgtagttagacatagtctactttttattcccctcttaagaattgg...
species | Arabidopsis thaliana |
transcript | AT4G27600.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TGGCAATGGCTGGCAGTATTGGAGGTGACCCTACTCGGTAGCTTTTACGG GACTAAACTACGACGAGCAEST: gi|164116023|gb|ES047400.1|ES047400
genomic: TGGCAATGGCTGGCAGTATTGGAGGTGACCCT-CTCGGTAGCTTTTACGGgtactaaact ... gtttctatagGACTAAACTACGACGAGCA
EST: GTGGCAATGGCTGGCAGTATTGGAGGTGACCCTCTCGGTAGCTTTTACGG GACTAAACTACGACGAGCAAATGTAAA
genomic: GTGGCAATGGCTGGCAGTATTGGAGGTGACCCTCTCGGTAGCTTTTACGGgtactaaact ... gtttctatagGACTAAACTACGACGAGCAAATGTAAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTGCTCTCGCAAGATTAGGTTCTCAATCCATCTGTGACCGGCCTTTGAATGTGGCAATGGCTGGCAGTATTGGAGGTGACCCTCTCGGTAGCTTTTACGGgtactaaactgtcttacttatatggcccttctctttttttttggctaattgtgtatgtagttagacatagtctactttttattcccctcttaagaattgg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -cccttctc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -cccctctt