Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|116425894|gb|EG468486.1|EG468486EST: TGATGTCAAGCTTGGTCAGGAATACGAGCTTGTTGTCACCACTTACGCCG GGCTTTGCAGATACAGAGTTGGTGATTTATTGAGAGTGACTGGTTTCAAGA
genomic: TGATGTCAAGCTTGGTCAGGAATACGAGCTTGTTGTCACCACTTACGCCGgtaagaaaac ... tttgttgcagGGCTTTGCAGATACAGAGTTGGTGATTTATTGAGAGTGACTGGTTTCAAGA
EST:
gi|86065068|gb|DR360825.1|DR360825EST: TGATGTCAAGCTTGGTCAGGAATACGAGCTTGTTGTCACCACTTACGCCG GGCTTTGCAGATACAGAGGTGGTGATTTATTGAGAGTGACTGGTTTCAAGA
genomic: TGATGTCAAGCTTGGTCAGGAATACGAGCTTGTTGTCACCACTTACGCCGgtaagaaaac ... tttgttgcagGGCTTTGCAGATACAGAGTTGGTGATTTATTGAGAGTGACTGGTTTCAAGA
EST:
gi|86065067|gb|DR360824.1|DR360824EST: GATGTCAAGCTTGGTCAGGAATACGAGCTTGTTGTCACCACTTACGCCCG GGCTTTGCAGATACAGAGTTGGTGATTTATTGAGAGTGACTGGTTTCAAG
genomic: GATGTCAAGCTTGGTCAGGAATACGAGCTTGTTGTCACCACTTACGCC-Ggtaagaaaac ... tttgttgcagGGCTTTGCAGATACAGAGTTGGTGATTTATTGAGAGTGACTGGTTTCAAG
EST:
gi|86065066|gb|DR360823.1|DR360823EST: TGATGTCAAGCTTGGTCAGGAATACGAGCTTGTTGTCACCACTTACGCCG GGCTTTGCAGATACAGAGTTGGTGATTTATTGAGAGTGACTGGTTTCAAGA
genomic: TGATGTCAAGCTTGGTCAGGAATACGAGCTTGTTGTCACCACTTACGCCGgtaagaaaac ... tttgttgcagGGCTTTGCAGATACAGAGTTGGTGATTTATTGAGAGTGACTGGTTTCAAGA
EST:
gi|116443602|gb|EG486194.1|EG486194EST: GTCAAGCTTGGTCAGGAATACGAGCTTGTTGTCACCACTTACGCCG GGCTTTGCAGATACAGAGTTGGTGATTTATTGAGAGTGACTGGTTTCAAGA
genomic: GTCAAGCTTGGTCAGGAATACGAGCTTGTTGTCACCACTTACGCCGgtaagaaaac ... tttgttgcagGGCTTTGCAGATACAGAGTTGGTGATTTATTGAGAGTGACTGGTTTCAAGA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CTTCCTAAAGCACTCACTGAGAAAGAGCAACAAGAGCTTGTTGATCTAGTTGATGTCAAGCTTGGTCAGGAATACGAGCTTGTTGTCACCACTTACGCCGgtaagaaaacaaaacttcttgattcatttatagtcaaaagattagaaattttttaagggtctgttctaatgttttgtgtatttgttgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT