1 5' 3' | 2 5' 3' | 3 5' 3' |
AAGGAGAACGATGTTGTTGTTGAGGATGTGAAAGATGGAGACGAAGACGATGATGATGTTGATGACGACGACGATGAGATTGCTGATGgtatttttactcttttactcgatttgattgttttcgtttggtggtttagggatgtttctggaatcatgttgtggatttgtgattgaatcaatctgtttcgagtctggattaggttttctaggttttgctatgtatgacatttgttagggttttgatgttgttattgttgttgttgttgttgtttatgtgaag
species | Arabidopsis thaliana |
transcript | AT4G10480.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TGATGATGTTGATGACGACGACGATGAGATTGCTGATG GAGCTGGTGAGAATGAGGCTTCCAAGCAAAGTAGAAGCGAGAAGAAAAGCEST: gi|163995958|gb|ES206262.1|ES206262
genomic: TGATGATGTTGATGACGACGACGATGAGATTGCTGATGgtatttttac ... ttatgtgaagGAGCTGGTGAGAATGAGGCTTCCAAGCAAAGTAGAAGCGAGAAGAAAAGC
EST: ACGAAGACGATGATGATGTTGATGACGACGACGATGAGATTGCTGATG GAGCTGGTGAGAATGAGGCTTCCAAGCAAAGTAGAAGCG
genomic: ACGAAGACGATGATGATGTTGATGACGACGACGATGAGATTGCTGATGgtatttttac ... ttatgtgaagGAGCTGGTGAGAATGAGGCTTCCAAGCAAAGTAGAAGCG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAGGAGAACGATGTTGTTGTTGAGGATGTGAAAGATGGAGACGAAGACGATGATGATGTTGATGACGACGACGATGAGATTGCTGATGgtatttttactcttttactcgatttgattgttttcgtttggtggtttagggatgtttctggaatcatgttgtggatttgtgattgaatcaatctgtttcgagtctggattaggttttctaggttttgctatgtatgacatttgttagggttttgatgttgttattgttgttgttgttgttgtttatgtgaag
- - - - - - - - - - - - - - - - - - - - CGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT