1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
CGGATTTCTTCAAGGTAGTGTGCTTGGAGTGGTGGCTGGAGTTATCACTGCGGTCCAACTCTTTGGACCGGTGCTACATAGTGATCAACCTTTGTCTAAGgtgattgtgactctacatataaccctagaatctaaaaaataaatcactaaacaaccatatgtttctagttaaatagtgggagtggtcctgtaattaagaa...
species | Arabidopsis thaliana |
transcript | AT3G20395.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CGGTCCAACTCTTTGGACCGGTGCTACATAGTGATCAACCTTTGTCTAAG GTGGCTTTACTCAGGAGAGTAGTGAATGGGAAAGCCATTATGGGATTGGTTEST: gi|116403630|gb|EG446222.1|EG446222
genomic: CGGTCCAACTCTTTGGACCGGTGCTACATAGTGATCAACCTTTGTCTAAGgtgattgtga ... agagtggcagGTGGCTTTACTCAGGAGAGTAGTGAATGGGAAAGCCATTATGGGATTGGTT
EST: CGGTCCAACTCTTTGGACCGGTGCTACATAGTGATCAACCTTTGTCTAAG GTGGCTTTACTCAGGAGAGTAGTGAATGGGAAAGCCATTATGGGATTGGTT
genomic: CGGTCCAACTCTTTGGACCGGTGCTACATAGTGATCAACCTTTGTCTAAGgtgattgtga ... agagtggcagGTGGCTTTACTCAGGAGAGTAGTGAATGGGAAAGCCATTATGGGATTGGTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGGATTTCTTCAAGGTAGTGTGCTTGGAGTGGTGGCTGGAGTTATCACTGCGGTCCAACTCTTTGGACCGGTGCTACATAGTGATCAACCTTTGTCTAAGgtgattgtgactctacatataaccctagaatctaaaaaataaatcactaaacaaccatatgtttctagttaaatagtgggagtggtcctgtaattaagaa
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- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctaaacaa