1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GATGGTGTTCCTATTGGTCGTAAAGTTGATCTCAATGCTTACAACAGCTACGAACAGCTCTCTTTTGTCGTTGACAAACTCTTCAGAGGTCTACTCGCAGgttaaatcttaatctcaaattctgttttttagttctttaggagtgttacttgtgtttactgagtatgatttgtgtatgttgttggtttatag
species | Arabidopsis thaliana |
transcript | AT3G16500.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CTCTTTTGTCGTTTGACAAACTCTTCAGAGGTCTACTCGCAG CTCAAAGAGATATCTCTGATGGTCTAAGGAGAAGAGAAACCTATCATTGGAEST: gi|86048607|gb|DR344362.1|DR344362
genomic: CTCTTTTGTCG-TTGACAAACTCTTCAGAGGTCTACTCGCAGgttaaatctt ... tggtttatagCTCAAAGAGATATCTCTGATGGTC-AAGGAGAAGAGAAACCTATCATTGGA
EST: CGAACAGCTCTCTTTTGTCGGTGACAAACTCTTCAGAGGTCTACTCGCAG CTCAAAGAGATATCTCTGATGGTC
genomic: CGAACAGCTCTCTTTTGTCGTTGACAAACTCTTCAGAGGTCTACTCGCAGgttaaatctt ... tggtttatagCTCAAAGAGATATCTCTGATGGTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATGGTGTTCCTATTGGTCGTAAAGTTGATCTCAATGCTTACAACAGCTACGAACAGCTCTCTTTTGTCGTTGACAAACTCTTCAGAGGTCTACTCGCAGgttaaatcttaatctcaaattctgttttttagttctttaggagtgttacttgtgtttactgagtatgatttgtgtatgttgttggtttatag
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