Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|47830258|gb|CK119942.1|CK119942EST: TACGTGGCCTACCATGATGAAGAATGGGGAGTTCCAGTTCATGATGACAA GACGTTGTTCGAACTGCTGACCCTAAGCGGCGCACAAGTAGGCTCCGATTG
genomic: TACGTGGCCTACCATGATGAAGAATGGGGAGTTCCAGTTCATGATGACAAgtgcgtgaca ... aaattttcagGACGTTGTTCGAACTGCTGACCCTAAGCGGCGCACAAGTAGGCTCCGATTG
EST:
gi|125302026|gb|EL316111.1|EL316111EST: AATGGGGAGTTCCAGTTCATGATGACAA GACGTTGTTCGAACTGCTGACCCTAAGCGGCGCACAAGTAGGCTCCGATTG
genomic: AATGGGGAGTTCCAGTTCATGATGACAAgtgcgtgaca ... aaattttcagGACGTTGTTCGAACTGCTGACCCTAAGCGGCGCACAAGTAGGCTCCGATTG
EST:
gi|19874828|gb|AU235659.1|AU235659EST: ACGTGGCCTACCATGATGAAGAATGGGGGAGTTCCAGTTCATGATGACNA GACGTTGTTCGAACTGCTGACCCCTAAGCGGCGCACAAGTAGGCTCCGATT
genomic: ACGTGGCCTACCATGATGAAGAATGGGG-AGTTCCAGTTCATGATGACAAgtgcgtgaca ... aaattttcagGACGTTGTTCGAACTGCTGACCC-TAAGCGGCGCACAAGTAGGCTCCGATT
EST:
gi|116427571|gb|EG470163.1|EG470163EST: TACGTGGCCTACCATGATGAAGAATGGGGAGTTCCAGTTCATGATGACAA GACGTTGTTCGAACTGCTGACCCTAAGCGGCGCACAAGTAGGCTCCGATTG
genomic: TACGTGGCCTACCATGATGAAGAATGGGGAGTTCCAGTTCATGATGACAAgtgcgtgaca ... aaattttcagGACGTTGTTCGAACTGCTGACCCTAAGCGGCGCACAAGTAGGCTCCGATTG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
ATCCTATTTACGTGGCCTACCATGATGAAGAATGGGGAGTTCCAGTTCATGATGACAAgtgcgtgacataattaatacttctttccaaatgaaaacgtcattgtacattagttcattttgttcaaaattaaattagttatgttaaattttcag
- - - - - - - - - - - - TGAAGA