Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|86078453|gb|DR374210.1|DR374210EST: AGAACGGAATCAAGAAGCCAAGGAGACACCGTCACACACCAACCAGAGGA ATGGATCCTAAATTCCTAAGAAACCAGAGGTATGCAAG
genomic: AGAACGGAATCAAGAAGCCAAGGAGACACCGTCACACACCAACCAGAGGAgtaagagtct ... aatgttgcagATGGATCCTAAATTCCTAAGAAACCAGAGGTATGCAAG
EST:
gi|152034411|gb|BP827764.2|BP827764EST: AGAACGGAATCAAGAAGCCAAGGAGACACCGTCACACACCAACCAGAGGA ATGGATCCTAAATTCCTAAGAAACCAGAGGTATGCAAGGAAGCACAACGTC
genomic: AGAACGGAATCAAGAAGCCAAGGAGACACCGTCACACACCAACCAGAGGAgtaagagtct ... aatgttgcagATGGATCCTAAATTCCTAAGAAACCAGAGGTATGCAAGGAAGCACAACGTC
EST:
gi|163971170|gb|ES014334.1|ES014334EST: AGAACGGAATCAAGAAGCCAAGGAGACACCGTCACACACCAACCAGAGGA ATGGATCCTAAATTCCTGAGAAACCAG
genomic: AGAACGGAATCAAGAAGCCAAGGAGACACCGTCACACACCAACCAGAGGAgtaagagtct ... aatgttgcagATGGATCCTAAATTCCTAAGAAACCAG
EST:
gi|164146885|gb|ES196505.1|ES196505EST: AGAACGGAATCAAGAAGCCAAGGAGACACCGTCACACACCAACCAGAGGA ATGGATCCTAAATTCCTGAGAAACCAGAG
genomic: AGAACGGAATCAAGAAGCCAAGGAGACACCGTCACACACCAACCAGAGGAgtaagagtct ... aatgttgcagATGGATCCTAAATTCCTAAGAAACCAGAG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GGCGAAATCGAAGAATCACACGGCGCACAATCAGTCTGCCAAGGCGCATAAGAACGGAATCAAGAAGCCAAGGAGACACCGTCACACACCAACCAGAGGAgtaagagtctctgttacattttaaacctataaacgattacagattctgatgttacattttaaagctataaacaattttcagattcggatgttaccttccaagtttgatatttaatctatttttgtgaaatgttgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGGA