Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|125186415|gb|EL201369.1|EL201369EST: TTGAAGCTTCTCGTTTTGGGAGCACAGAACTTGTGCGCATCTTGTTGCAG ATTGCTCAAAGGAATA
genomic: TTGAAGCTTCTCGTTTTGGGAGCACAGAACTTGTGCGCATCTTGTTGCAGgtaaatctaa ... cctggtgcagATTGCTCAAAGGAATA
EST:
gi|86087288|gb|DR383047.1|DR383047EST: TTGAAGCTTCTCGTTTTGGGAGCACAGAACTTGTGCGCATCTTGTTGCAG ATTGCTCAAAGGAATAGCTTAGACGTGGATGTTGACTTAGCCCTTGGTTTT
genomic: TTGAAGCTTCTCGTTTTGGGAGCACAGAACTTGTGCGCATCTTGTTGCAGgtaaatctaa ... cctggtgcagATTGCTCAAAGGAATAGCTTAGACGTGGATGTTGACTTAGCCCTTGGTTTT
EST:
gi|124715640|gb|EH807042.1|EH807042EST: TTGAAGCTTCTCGTTTTGGGAGCACAGAACTTGTGCGCATCTTGTTGCAG ATTGCTCAAAAGGAATA
genomic: TTGAAGCTTCTCGTTTTGGGAGCACAGAACTTGTGCGCATCTTGTTGCAGgtaaatctaa ... cctggtgcagATTGCTCAAA-GGAATA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GCTCGGTATGCTGGTGGAAGGAGGCGCAGATAATGTAAATCAGTGCTTCCTTGAAGCTTCTCGTTTTGGGAGCACAGAACTTGTGCGCATCTTGTTGCAGgtaaatctaattcttaatgactgcttgcaagttactttgtgcaatctaactgaactttttcctggtgcag
- - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCA