1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
ATTGGAATGGAGATAATGTCAATTGCATTACCTGCTGCATTAGCTTTAGCTGCTGATCCTATAACATCTCTTGTCGACACTGCCTTCGTTGGCCATATTGgtaaatacttactttttgcttggtttcaacaatttcacatttttcgaaagttcacatttttaacattcatatgtgtaatgtgacag
species | Arabidopsis thaliana |
transcript | AT2G38330.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TGCTGATCCTATAACATCTCTTGTCGACACTGCCTTCGTTGGCCATATTG GTTCTGCGGAATTAEST: gi|86064735|gb|DR360492.1|DR360492
genomic: TGCTGATCCTATAACATCTCTTGTCGACACTGCCTTCGTTGGCCATATTGgtaaatactt ... aatgtgacagGTTCTGCGGAATTA
EST: TGCTGATCCTATAACATCTCTTGTCGACACTGCCTTCGTTGGCCATATTG GTTCTGCGGAATTAGCTGCAGTAGGAGTGTCAGTTTCTGTATTCAATTTGGEST: gi|86064736|gb|DR360493.1|DR360493
genomic: TGCTGATCCTATAACATCTCTTGTCGACACTGCCTTCGTTGGCCATATTGgtaaatactt ... aatgtgacagGTTCTGCGGAATTAGCTGCAGTAGGAGTGTCAGTTTCTGTATTCAATTTGG
EST: TGCTGATCCTATAACATCTCTTGTCGACACTGCCTTCGTTGGCCATATTG GTTCTGCGGAATTAGCTGCAGTAGGAGTGTCAGTTTCTGTATTCAATTTGGEST: gi|19876049|gb|AU236880.1|AU236880
genomic: TGCTGATCCTATAACATCTCTTGTCGACACTGCCTTCGTTGGCCATATTGgtaaatactt ... aatgtgacagGTTCTGCGGAATTAGCTGCAGTAGGAGTGTCAGTTTCTGTATTCAATTTGG
EST: TGCTGATCCTATAACATCTCTTGTCGACACTGCCTTCGTTGGCCATATTG GTTCTGCGGAATTAGCTGCAGTAGGAGTGTCAGTTTCTGTATTCAATTTGGEST: gi|86064739|gb|DR360496.1|DR360496
genomic: TGCTGATCCTATAACATCTCTTGTCGACACTGCCTTCGTTGGCCATATTGgtaaatactt ... aatgtgacagGTTCTGCGGAATTAGCTGCAGTAGGAGTGTCAGTTTCTGTATTCAATTTGG
EST: TGCTGATCCTATAACATCTCTTGTCGACACTGCCTTCGTTGGCCATATTG GTTCTGCGGAATTAGCTGCAGTAGGAGTGTCAGTTTCTGTATTCAATTTGGEST: gi|86064738|gb|DR360495.1|DR360495
genomic: TGCTGATCCTATAACATCTCTTGTCGACACTGCCTTCGTTGGCCATATTGgtaaatactt ... aatgtgacagGTTCTGCGGAATTAGCTGCAGTAGGAGTGTCAGTTTCTGTATTCAATTTGG
EST: TGCTGATCCTATAACATCTCTTGTCGACACTGCCTTCGTTGGCCATATTG GTTCTGCGGAATTAGCTGCAGTAGGAGTGTCAGTTTCTGTATTCAATTTGGEST: gi|86064740|gb|DR360497.1|DR360497
genomic: TGCTGATCCTATAACATCTCTTGTCGACACTGCCTTCGTTGGCCATATTGgtaaatactt ... aatgtgacagGTTCTGCGGAATTAGCTGCAGTAGGAGTGTCAGTTTCTGTATTCAATTTGG
EST: TGCTGATCCTATAACATCTCTTGTCGACACTGCCTTCGTTGGCCATATTG GTTCTGCGGAATTAGCTGCAGTAGGAGTGTCAGTTTCTGTATTCAATTTGG
genomic: TGCTGATCCTATAACATCTCTTGTCGACACTGCCTTCGTTGGCCATATTGgtaaatactt ... aatgtgacagGTTCTGCGGAATTAGCTGCAGTAGGAGTGTCAGTTTCTGTATTCAATTTGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTGGAATGGAGATAATGTCAATTGCATTACCTGCTGCATTAGCTTTAGCTGCTGATCCTATAACATCTCTTGTCGACACTGCCTTCGTTGGCCATATTGgtaaatacttactttttgcttggtttcaacaatttcacatttttcgaaagttcacatttttaacattcatatgtgtaatgtgacag
- - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT