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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTGATACCCGAAGGTCCTAACGGTGAGGGCCGTTTATCAAACCAGAACAGCAACCCTAATTTACTCTCTTCTGCTTCTATCAGTATTACTCAGTTTCCTGgtatgttgcattgatttaaaagttgtgcttgtatgcttgttttgttagcttagttgattttttttaatggaaatggcgatgttgcag

Basic information

species Arabidopsis thaliana
transcript AT2G36960.3
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|86069765|gb|DR365522.1|DR365522
EST:     CAACCCTAATTTACTCTCTTCTGCTTCTATCAGTATTACTCAGTTTCCTG                         CTAAGAAGCCGACTAGGCAATGGGCTGCTTGGACACATCAAGAAGAGGAAA
genomic: CAACCCTAATTTACTCTCTTCTGCTTCTATCAGTATTACTCAGTTTCCTGgtatgttgca ... gatgttgcagCTAAGAAGCCGACTAGGCAATGGGCTGCTTGGACACATCAAGAAGAGGAAA
EST: gi|86069766|gb|DR365523.1|DR365523
EST:     CAACCCTAATTTACTCTCTTCTGCTTCTATCAGTATTACTCAGTTTCCTG                         CTAAGAAGCCGACTAGGCAATGGGCTGCTTGGACACATCAAGAAGAGGAAA
genomic: CAACCCTAATTTACTCTCTTCTGCTTCTATCAGTATTACTCAGTTTCCTGgtatgttgca ... gatgttgcagCTAAGAAGCCGACTAGGCAATGGGCTGCTTGGACACATCAAGAAGAGGAAA
EST: gi|86069770|gb|DR365527.1|DR365527
EST:     CAACCCTAATTTACTCTCTTCTGCTTCTATCAGTATTACTCAGTTTCCTG                         CTAAGAAGCCGACTAGGCAATGGGCTGATTGGACACATCAAGAAGAGGAAA
genomic: CAACCCTAATTTACTCTCTTCTGCTTCTATCAGTATTACTCAGTTTCCTGgtatgttgca ... gatgttgcagCTAAGAAGCCGACTAGGCAATGGGCTGCTTGGACACATCAAGAAGAGGAAA
EST: gi|86069767|gb|DR365524.1|DR365524
EST:     CAACCCTAATTTACTCTCTTCTGCTTCTATCAGTATTACTCAGTTTCCTG                         CTAAGAAGCCGACTAGGCAATGGGCTGCTTGGACACATCAAGAAGAGGAAA
genomic: CAACCCTAATTTACTCTCTTCTGCTTCTATCAGTATTACTCAGTTTCCTGgtatgttgca ... gatgttgcagCTAAGAAGCCGACTAGGCAATGGGCTGCTTGGACACATCAAGAAGAGGAAA
EST: gi|86069769|gb|DR365526.1|DR365526
EST:     CAACCCTAATTTACTCTCTTCTGCTTCTATCAGTATTACTCAGTTTCCTG                         CTAAGAAGCCGACTAGGCAATGGGCTGCTTGGACACATCAAGAAGAGGAAA
genomic: CAACCCTAATTTACTCTCTTCTGCTTCTATCAGTATTACTCAGTTTCCTGgtatgttgca ... gatgttgcagCTAAGAAGCCGACTAGGCAATGGGCTGCTTGGACACATCAAGAAGAGGAAA
EST: gi|86069768|gb|DR365525.1|DR365525
EST:     CAACCCTAATTTACTCTCTTCTGCTTCTATCAGTATTACTCAGTTTCCTG                         CTAAGAAGCCGACTAGGCAATGGGCTGCTTGGACACATCAAGAAGAGGAAA
genomic: CAACCCTAATTTACTCTCTTCTGCTTCTATCAGTATTACTCAGTTTCCTGgtatgttgca ... gatgttgcagCTAAGAAGCCGACTAGGCAATGGGCTGCTTGGACACATCAAGAAGAGGAAA
EST: gi|86069771|gb|DR365528.1|DR365528
EST:     CAACCCTAATTTACTCTCTTCTGCTTCTATCAGTATTACTCAGTTTCCTG                         CTAAGAAGCCGACTAGGCAATGGGCTGCTTGGACACATCAAGAAGAGGAAA
genomic: CAACCCTAATTTACTCTCTTCTGCTTCTATCAGTATTACTCAGTTTCCTGgtatgttgca ... gatgttgcagCTAAGAAGCCGACTAGGCAATGGGCTGCTTGGACACATCAAGAAGAGGAAA