Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|86070103|gb|DR365860.1|DR365860EST: GTTTCTTGAAGACCATCCAGGTGGGGACGATGTTCTCTTGTCTTCAACAG GTAAGGATGCAACGGATGATTTTGAGGACGTGGGTCACAGCGAGAGTGCAA
genomic: GTTTCTTGAAGACCATCCAGGTGGGGACGATGTTCTCTTGTCTTCAACAGgtctgtataa ... ctcttttcagGTAAGGATGCAACGGATGATTTTGAGGACGTGGGTCACAGCGAGAGTGCAA
EST:
gi|86070102|gb|DR365859.1|DR365859EST: GTTTCTTGAAGACCATCCAGGTGGGGACGATGTTCTCTTGTCTTCAACAG GTAAGGATGCAACGGATGATTTTGAGGACGTGGGTCACAGCGAGAGTGCAA
genomic: GTTTCTTGAAGACCATCCAGGTGGGGACGATGTTCTCTTGTCTTCAACAGgtctgtataa ... ctcttttcagGTAAGGATGCAACGGATGATTTTGAGGACGTGGGTCACAGCGAGAGTGCAA
EST:
gi|86070105|gb|DR365862.1|DR365862EST: GTTTCTTGAAGACCATCCAGGTGGGGACGATGTTCTCTTGTCTTCAACAG GTAAGGATGCAACGGATGATTTTGAGGACGTGGGTCACAGCGAGAGTGCAA
genomic: GTTTCTTGAAGACCATCCAGGTGGGGACGATGTTCTCTTGTCTTCAACAGgtctgtataa ... ctcttttcagGTAAGGATGCAACGGATGATTTTGAGGACGTGGGTCACAGCGAGAGTGCAA
EST:
gi|86070104|gb|DR365861.1|DR365861EST: GTTTCTTGAAGACCATCCAGGTGGGGACGATGTTCTCTTGTCTTCAACAG GTAAGGATGCAACGGATGATTTTGAGGACGTGGGTCACAGCGAGAGTGCAA
genomic: GTTTCTTGAAGACCATCCAGGTGGGGACGATGTTCTCTTGTCTTCAACAGgtctgtataa ... ctcttttcagGTAAGGATGCAACGGATGATTTTGAGGACGTGGGTCACAGCGAGAGTGCAA
EST:
gi|124715994|gb|EH807396.1|EH807396EST: ACGATGTTCTCTTGTCTTCAACAG GTAAGGATGCAACGGATGATTTTGAGGACGTGGGTCACAGCGAGAGTGCAA
genomic: ACGATGTTCTCTTGTCTTCAACAGgtctgtataa ... ctcttttcagGTAAGGATGCAACGGATGATTTTGAGGACGTGGGTCACAGCGAGAGTGCAA
EST:
gi|86088286|gb|DR384045.1|DR384045EST: GTTTCTTGAAGACCATCCAGGTGGGGACGATGTTCTCTTGTCTTCAACAG GTAAGGATGCAACGGATGATTTTGAGGACGTGGGTCACAGCGAGAGTGCAA
genomic: GTTTCTTGAAGACCATCCAGGTGGGGACGATGTTCTCTTGTCTTCAACAGgtctgtataa ... ctcttttcagGTAAGGATGCAACGGATGATTTTGAGGACGTGGGTCACAGCGAGAGTGCAA
EST:
gi|86073059|gb|DR368816.1|DR368816EST: GTTTCTTGAAGACCATCCAGGTGGGGACGATGTTCTCTTGTCTTCAACAG GTAAGGATGCAACGGATGATTTTGAGGACGTGGGTCACAGCGAGAGTGCAA
genomic: GTTTCTTGAAGACCATCCAGGTGGGGACGATGTTCTCTTGTCTTCAACAGgtctgtataa ... ctcttttcagGTAAGGATGCAACGGATGATTTTGAGGACGTGGGTCACAGCGAGAGTGCAA
EST:
gi|86070106|gb|DR365863.1|DR365863EST: GTTTCTTGAAGACCATCCAGGTGGGGACGATGTTCTCTTGTCTTCAACAG GTAAGGATGCAACGGATGATTTTGAGGACGTGGGTCACAGCGAGAGTGCAA
genomic: GTTTCTTGAAGACCATCCAGGTGGGGACGATGTTCTCTTGTCTTCAACAGgtctgtataa ... ctcttttcagGTAAGGATGCAACGGATGATTTTGAGGACGTGGGTCACAGCGAGAGTGCAA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GTGTACAATGTGACCAAGTTTCTTGAAGACCATCCAGGTGGGGACGATGTTCTCTTGTCTTCAACAGgtctgtataaacacaactatcaccatgctcccggcttagtggagatcaatccatcggtttttgattcttattctcttttcag
- - - - - - - - - - - TTGAAG
- - - - - - - - - - - TGAAGA