Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|86087662|gb|DR383421.1|DR383421EST: TTTTTCTCGGGTGCTGAAGAAGAACAACAGAAGCAATTCATTGAGAA GTACAACTTTGATCCTGTGAACGAACAACCACTACCAGGACGGTTTGAATG
genomic: TTTTTCTCGGGTGCTGAAGAAGAACAACAGAAGCAATTCATTGAGAAgtatgtgttt ... ctttcttcagGTACAACTTTGATCCTGTGAACGAACAACCACTACCAGGACGGTTTGAATG
EST:
gi|125034868|gb|EL107137.1|EL107137EST: GAGTTTTTCTCGGGTGCTGAAGAAGAACAACAGAAGCAATTCATTGAGAA GTACAACTTTGAT
genomic: GAGTTTTTCTCGGGTGCTGAAGAAGAACAACAGAAGCAATTCATTGAGAAgtatgtgttt ... ctttcttcagGTACAACTTTGAT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
ACAGTTTGTCACGCAGCCATCGTCGCCGACCAACTACACCTGAAATGGACGAGTTTTTCTCGGGTGCTGAAGAAGAACAACAGAAGCAATTCATTGAGAAgtatgtgtttcctcgtttcatctgttctgttcttttggttatgagtttccagtttgttctgttcttctcttttggtcttgtgtctctaatggtttctgtcaactctttcttcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA