1 5' 3' | 2 5' 3' | 3 5' 3' |
GTACATGGATAAGAAGCTCCAAAgtaagttcaatatcttcatcttcttttatcgatagttagggaacttcagttttgtataacacattagctgagatgtgattgcaactttattctgtgaatc...
species | Arabidopsis thaliana |
transcript | AT2G23930.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CTTAAGAAGTACATGGATAAGAAGCTCCAAA TCAAGCTTAATGCTAACCGAATTGGTTACTGGAACTCTTCGTGGGTTTGATEST: gi|124756277|gb|EH846407.1|EH846407
genomic: CTTAAGAAGTACATGGATAAGAAGCTCCAAAgtaagttcaa ... tgaaatgcagTCAAGCTTAATGCTAACCGAA-TGGTTACTGGAACTCTTCGTGGGTTTGAT
EST: TAAGAAGCTCCAAA TCAAGCTTAATGCTAACCGAATGGTTACTGGAACTCTTCGTGGGTTTGATCEST: gi|164107895|gb|ES111649.1|ES111649
genomic: TAAGAAGCTCCAAAgtaagttcaa ... tgaaatgcagTCAAGCTTAATGCTAACCGAATGGTTACTGGAACTCTTCGTGGGTTTGATC
EST: AAGTACATGGATAAGAAGCTCCAAA TCAAGCTTAATGCTAACCGAATGEST: gi|47830339|gb|CK120023.1|CK120023
genomic: AAGTACATGGATAAGAAGCTCCAAAgtaagttcaa ... tgaaatgcagTCAAGCTTAATGCTAACCGAATG
EST: AAGTACATGGATAAGAAGCTCCAAA TCAAGCTTAATGCTAACCGAATGGTTACTGGAACTCTTCGTGGGTTTGATC
genomic: AAGTACATGGATAAGAAGCTCCAAAgtaagttcaa ... tgaaatgcagTCAAGCTTAATGCTAACCGAATGGTTACTGGAACTCTTCGTGGGTTTGATC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTACATGGATAAGAAGCTCCAAAgtaagttcaatatcttcatcttcttttatcgatagttagggaacttcagttttgtataacacattagctgagatgtgattgcaactttattctgtgaatc
- CATGGA
- - - - - AAGAAG
- - - - - AGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ataacaca