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 5'  3'   		2  
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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGATTGATAAAGATGGATTCTTGATCAATCATGCTCGTGTTTTAGTCGGTTCTGGTAGAGAGAGTTATGAGAAGGGCAAAAAAGCTCTCCAGAATTGGAAgtatgttttgctttttatcatctcaaatcaatggaacatcaatcggttctgttctcattgatttctaattgcag

Basic information

species Arabidopsis thaliana
transcript AT2G17695.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|86061786|gb|DR357543.1|DR357543
EST:     TCTGGTAGAGAGAGTTATGAGAAGGGCAAAAAAGCTCTCCAGAATTGGAA                         GCATTTTGGTATGGATTGGGCATTTGTTGATCCTGCAACACCTGTTGAAAC
genomic: TCTGGTAGAGAGAGTTATGAGAAGGGCAAAAAAGCTCTCCAGAATTGGAAgtatgttttg ... ctaattgcagGCATTTTGGTATGGATTGGGCATTTGTTGATCCTGCAACACCTGTTGAAAC
EST: gi|86086361|gb|DR382120.1|DR382120
EST:     TCTGGTAGAGAGAGTTATGAGAAGGGCAAAAAAGCTCTCCAGAATTGGAA                         GCATTTTGGTATGGATTGGGCATTTGTTGATCCTGCAACACCTGTTGAAAC
genomic: TCTGGTAGAGAGAGTTATGAGAAGGGCAAAAAAGCTCTCCAGAATTGGAAgtatgttttg ... ctaattgcagGCATTTTGGTATGGATTGGGCATTTGTTGATCCTGCAACACCTGTTGAAAC
EST: gi|86077284|gb|DR373041.1|DR373041
EST:     TCTGGTAGAGAGAGTTATGAGAAGGGCAAAAAAGCTCTCCAGAATTGGAA                         GCATTTTGGTATGGATTGGGCATTTGTTGATCCTGCAACACCTGTTGAAAC
genomic: TCTGGTAGAGAGAGTTATGAGAAGGGCAAAAAAGCTCTCCAGAATTGGAAgtatgttttg ... ctaattgcagGCATTTTGGTATGGATTGGGCATTTGTTGATCCTGCAACACCTGTTGAAAC
EST: gi|19878362|gb|AU239193.1|AU239193
EST:     TCTGGTAGAGAGAGTTATGAGAAGGGCAAAAAAGCTCTCCAGAATTGGAA                         GCATTTTGGTATGGATTGGGCATTTGTTGATCCTGCAACACCTGTTGAAAC
genomic: TCTGGTAGAGAGAGTTATGAGAAGGGCAAAAAAGCTCTCCAGAATTGGAAgtatgttttg ... ctaattgcagGCATTTTGGTATGGATTGGGCATTTGTTGATCCTGCAACACCTGTTGAAAC
EST: gi|86061618|gb|DR357375.1|DR357375
EST:     TCTGGTAGAGAGAGTTATGAGAAGGGCAAAAAAGCTCTCCAGAATTGGAA                         GCATTTTGGTATGGATTGGGCATTTGTTGATCCTGCAACACCTGTTGAAAC
genomic: TCTGGTAGAGAGAGTTATGAGAAGGGCAAAAAAGCTCTCCAGAATTGGAAgtatgttttg ... ctaattgcagGCATTTTGGTATGGATTGGGCATTTGTTGATCCTGCAACACCTGTTGAAAC
EST: gi|86061787|gb|DR357544.1|DR357544
EST:     TCTGGTAGAGAGAGTTATGAGAAGGGCAAAAAAGCTCTCCAGAATTGGAA                         GCATTTTGGTATGGATTGGGCATTTGTTGATCCTGCAACACCTGTTG
genomic: TCTGGTAGAGAGAGTTATGAGAAGGGCAAAAAAGCTCTCCAGAATTGGAAgtatgttttg ... ctaattgcagGCATTTTGGTATGGATTGGGCATTTGTTGATCCTGCAACACCTGTTG
EST: gi|86084935|gb|DR380694.1|DR380694
EST:     TCTGGTAGAGAGAGTTATGAGAAGGGCAAAAAAGCTCTCCAGAATTGGAA                         GCATTTTGGTATGGATTGGGCATTTGTTGATCCTGCAACACCTGTTGAAAC
genomic: TCTGGTAGAGAGAGTTATGAGAAGGGCAAAAAAGCTCTCCAGAATTGGAAgtatgttttg ... ctaattgcagGCATTTTGGTATGGATTGGGCATTTGTTGATCCTGCAACACCTGTTGAAAC
EST: gi|86061788|gb|DR357545.1|DR357545
EST:     TCTGGTAGAGAGAGTTATGAGAAGGGCAAAAAAGCTCTCCAGAATTGGAA                         GCATTTTGGTATGGATTGGGCATTTGTTGA
genomic: TCTGGTAGAGAGAGTTATGAGAAGGGCAAAAAAGCTCTCCAGAATTGGAAgtatgttttg ... ctaattgcagGCATTTTGGTATGGATTGGGCATTTGTTGA