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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CACAGGATTTCAATCAAAGGGGTCATATTTGTTTGGACATTTTAGTATGCACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctctctcactagtcactaataatacttagatcaaatttaaatgattaacaatatttattacaaataaattgtgtgaag

Basic information

species Arabidopsis thaliana
transcript AT2G06850.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|125111616|gb|EL163021.1|EL163021
EST:     TAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGA
genomic: TAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGA
EST: gi|124986780|gb|EL059276.1|EL059276
EST:     CTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTG
genomic: CTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTG
EST: gi|124876890|gb|EH956327.1|EH956327
EST:     AAGCTTCCAGCTGGTGACACAGCCGGGGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGG
genomic: AAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGG
EST: gi|124844540|gb|EH928977.1|EH928977
EST:     AAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTC-AT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTT
genomic: AAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTT
EST: gi|301502134|gb|HO207674.1|HO207674
EST:     ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|124757609|gb|EH847739.1|EH847739
EST:     TAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGT
genomic: TAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGT
EST: gi|124709819|gb|EH801221.1|EH801221
EST:     ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTACCATCTACCAACAA
genomic: ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAA
EST: gi|124854260|gb|EH938697.1|EH938697
EST:     TAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTT
genomic: TAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTT
EST: gi|124761838|gb|EH851968.1|EH851968
EST:     AAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTT
genomic: AAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTT
EST: gi|124884876|gb|EH963778.1|EH963778
EST:     ACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: ACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|124790158|gb|EH879837.1|EH879837
EST:     CCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: CCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|125283147|gb|EL297232.1|EL297232
EST:     CCGGAGTTGTCACAGCTTTCCAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: CCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|125268960|gb|EL283045.1|EL283045
EST:     CACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGA
genomic: CACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGA
EST: gi|125303963|gb|EL318048.1|EL318048
EST:     CTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: CTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|125264311|gb|EL278396.1|EL278396
EST:     AGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: AGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|125113328|gb|EL164183.1|EL164183
EST:     ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCGCAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTG
genomic: ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTG
EST: gi|124992036|gb|EL064305.1|EL064305
EST:     CTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: CTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|124962456|gb|EL036879.1|EL036879
EST:     GACACAGCCGGAGTTGTCACAGCTTTCTNT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: GACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|125266896|gb|EL280981.1|EL280981
EST:     CTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCT
genomic: CTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCT
EST: gi|125050103|gb|EL122372.1|EL122372
EST:     ACATAAAGCTTCCAGCTGGTGACACAGCCGGGGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCA
genomic: ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCA
EST: gi|125286099|gb|EL300184.1|EL300184
EST:     TAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTC
genomic: TAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTC
EST: gi|124764180|gb|EH854310.1|EH854310
EST:     TCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGACATGACGAGATAGACTTTGAGTTCCTT
genomic: TCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAG-CATGACGAGATAGACTTTGAGTTCCTT
EST: gi|124817105|gb|EH901971.1|EH901971
EST:     CTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: CTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|124888419|gb|EH967321.1|EH967321
EST:     ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAA
genomic: ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAA
EST: gi|124957844|gb|EL032635.1|EL032635
EST:     ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAA
genomic: ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAA
EST: gi|125211341|gb|EL226295.1|EL226295
EST:     GCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: GCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|125247055|gb|EL261140.1|EL261140
EST:     ACATAAAGCTTCCAGCTGGTGACACAGCCTGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAA
genomic: ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAA
EST: gi|124730927|gb|EH822329.1|EH822329
EST:     ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCA
genomic: ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCA
EST: gi|125057481|gb|EL126660.1|EL126660
EST:     CCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: CCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|124926734|gb|EL004532.1|EL004532
EST:     CTGGTGACACAGCCGGAGTTGTCACTAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: CTGGTGACACAGCCGGAGTTGTCAC-AGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|125039600|gb|EL111869.1|EL111869
EST:     ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAAC
genomic: ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAAC
EST: gi|125265441|gb|EL279526.1|EL279526
EST:     CTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: CTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|125311525|gb|EL325610.1|EL325610
EST:     TGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: TGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|124992223|gb|EL064492.1|EL064492
EST:     CTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGG
genomic: CTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGG
EST: gi|124772248|gb|EH862377.1|EH862377
EST:     CGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: CGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|124958775|gb|EL033495.1|EL033495
EST:     ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCA
genomic: ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCA
EST: gi|124909487|gb|EH983567.1|EH983567
EST:     CATTAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAA
genomic: CA-TAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAA
EST: gi|124861310|gb|EH945747.1|EH945747
EST:     TTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGA
genomic: TTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGA
EST: gi|125212807|gb|EL227761.1|EL227761
EST:     CAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: CAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|125018673|gb|EL090942.1|EL090942
EST:     ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAG
genomic: ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAG
EST: gi|125214901|gb|EL229163.1|EL229163
EST:     CCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: CCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|125316395|gb|EL330480.1|EL330480
EST:     ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATA
genomic: ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATA
EST: gi|124952944|gb|EL028175.1|EL028175
EST:     CCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: CCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|125014955|gb|EL087224.1|EL087224
EST:     CTGGTGGCACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: CTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|125241668|gb|EL255753.1|EL255753
EST:     ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGA
genomic: ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGA
EST: gi|124758956|gb|EH849086.1|EH849086
EST:     CCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: CCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|125180213|gb|EL197365.1|EL197365
EST:     ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAA
genomic: ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAA
EST: gi|125273274|gb|EL287359.1|EL287359
EST:     ACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: ACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|125254587|gb|EL268672.1|EL268672
EST:     ACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: ACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|124914804|gb|EH988678.1|EH988678
EST:     TAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGAT
genomic: TAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGAT
EST: gi|124730682|gb|EH822084.1|EH822084
EST:     CTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: CTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|124928003|gb|EL005686.1|EL005686
EST:     CCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: CCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|125211002|gb|EL225956.1|EL225956
EST:     TCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: TCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|125215773|gb|EL229857.1|EL229857
EST:     TGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: TGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|124759817|gb|EH849947.1|EH849947
EST:     ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGA
genomic: ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGA
EST: gi|125283880|gb|EL297965.1|EL297965
EST:     CATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTG
genomic: CATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTG
EST: gi|124788784|gb|EH878463.1|EH878463
EST:     CTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: CTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|125190819|gb|EL205773.1|EL205773
EST:     TAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACT
genomic: TAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACT
EST: gi|124863714|gb|EH948151.1|EH948151
EST:     ACAGCCGGAGTTGTCACAGCTTTCTAT                         CTTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGG
genomic: ACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagC-TATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGG

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
CACAGGATTTCAATCAAAGGGGTCATATTTGTTTGGACATTTTAGTATGCACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctctctcactagtcactaataatacttagatcaaatttaaatgattaacaatatttattacaaataaattgtgtgaag

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG