1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
TTATTTTGATTCTGATTCGAGTTTTTTGACATCGCGGGCTGAGCAGACTGATAGATATCATCGTCATCTAAGACTGCCTTACCCTGATGGACTCGCTGAGgtagagtgttgcttttgacttaagtttcatatggagcttgttccaatatgtatttttcttacatatgggtgtttcattgcag
species | Arabidopsis thaliana |
transcript | AT1G73760.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: ATAGATATCATCGTCATCTAAGACTGCCTTACCCTGATGGACTCGCTGAG ATGATGATGATGCEST: gi|86074752|gb|DR370509.1|DR370509
genomic: ATAGATATCATCGTCATCTAAGACTGCCTTACCCTGATGGACTCGCTGAGgtagagtgtt ... ttcattgcagATGATGATGATGC
EST: ATAGATATCATCGTCATCTAAGACTGCCTTACCCTGATGGACTCGCTGAG ATGATGATGATGCAGAATGGTTTTGTGATGGGAGGAGTATTAAGCTCATTC
genomic: ATAGATATCATCGTCATCTAAGACTGCCTTACCCTGATGGACTCGCTGAGgtagagtgtt ... ttcattgcagATGATGATGATGCAGAATGGTTTTGTGATGGGAGGAGTATTAAGCTCATTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTATTTTGATTCTGATTCGAGTTTTTTGACATCGCGGGCTGAGCAGACTGATAGATATCATCGTCATCTAAGACTGCCTTACCCTGATGGACTCGCTGAGgtagagtgttgcttttgacttaagtttcatatggagcttgttccaatatgtatttttcttacatatgggtgtttcattgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA