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AGAAGAAGAAGGAGACTGTGTTGAGGTTTTGGTGACTGAGCTAAGGAAGAAAGGGATGGTTGTTGATAGAGTCGTCGGTCTTGCTCATGAGTTTCTCAAGgtcggtctttctttgcccaatttacttgtaattttgtgaccaaataggggttttcaggtgtgaaagtctttgatttttcatacaaaattacttatctgaa...
species | Arabidopsis thaliana |
transcript | AT1G73020.2 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: AAGGGATGGTTGTTGATAGAGTCGTCGGTCTTGCTCATGAGTTTCTCAAG GTAGCAGCTCCTTCGGAGATCTTGGGCAATGCAGCTGCAGAGCTTCATATAEST: gi|116423945|gb|EG466537.1|EG466537
genomic: AAGGGATGGTTGTTGATAGAGTCGTCGGTCTTGCTCATGAGTTTCTCAAGgtcggtcttt ... atctctttagGTAGCAGCTCCTTCGGAGATCTTGGGCAATGCAGCTGCAGAGCTTCATATA
EST: AAGGGATGGTTGTTGATAGAGTCGTCGGTCTTGCTCATGAGTTTCTCAAG GTAGCAGCTCCTTCGGAGATCTTGGGCAATGCAGCTGCAGAGCTTCATATAEST: gi|116435864|gb|EG478456.1|EG478456
genomic: AAGGGATGGTTGTTGATAGAGTCGTCGGTCTTGCTCATGAGTTTCTCAAGgtcggtcttt ... atctctttagGTAGCAGCTCCTTCGGAGATCTTGGGCAATGCAGCTGCAGAGCTTCATATA
EST: AAGGGATGGTTGTTGATAGAGTCGTCGGTCTTGCTCATGAGTTTCTCAAG GTAGCAGCTCCTTCGGAGATCTTGGGCAATGCAGCTGCAGAGCTTCATATAEST: gi|116436459|gb|EG479051.1|EG479051
genomic: AAGGGATGGTTGTTGATAGAGTCGTCGGTCTTGCTCATGAGTTTCTCAAGgtcggtcttt ... atctctttagGTAGCAGCTCCTTCGGAGATCTTGGGCAATGCAGCTGCAGAGCTTCATATA
EST: AAGGGATGGTTGTTGATAGAGTCGTCGGTCTTGCTCATGAGTTTCTCAAG GTAGCAGCTCCTTCGGAGATCTTGGGCAATGCAGCTGCAGAGCTTCATATAEST: gi|116436358|gb|EG478950.1|EG478950
genomic: AAGGGATGGTTGTTGATAGAGTCGTCGGTCTTGCTCATGAGTTTCTCAAGgtcggtcttt ... atctctttagGTAGCAGCTCCTTCGGAGATCTTGGGCAATGCAGCTGCAGAGCTTCATATA
EST: AAGGGATGGTTGTTGATAGAGTCGTCGGTCTTGCTCATGAGTTTCTCAAG GTAGCAGCTCCTTCGGAGATCTTGGGCAATGCAGCTGCAGAGCTTCATATAEST: gi|116436360|gb|EG478952.1|EG478952
genomic: AAGGGATGGTTGTTGATAGAGTCGTCGGTCTTGCTCATGAGTTTCTCAAGgtcggtcttt ... atctctttagGTAGCAGCTCCTTCGGAGATCTTGGGCAATGCAGCTGCAGAGCTTCATATA
EST: AAGGGATGGTTGTTGATAGAGTCGTCGGTCTTGCTCATGAGTTTCTCAAG GTAGCAGCTCCTTCGGAGATCTTGGGCAATGCAGCTGCAGAGCTTCATATA
genomic: AAGGGATGGTTGTTGATAGAGTCGTCGGTCTTGCTCATGAGTTTCTCAAGgtcggtcttt ... atctctttagGTAGCAGCTCCTTCGGAGATCTTGGGCAATGCAGCTGCAGAGCTTCATATA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGAAGAAGAAGGAGACTGTGTTGAGGTTTTGGTGACTGAGCTAAGGAAGAAAGGGATGGTTGTTGATAGAGTCGTCGGTCTTGCTCATGAGTTTCTCAAGgtcggtctttctttgcccaatttacttgtaattttgtgaccaaataggggttttcaggtgtgaaagtctttgatttttcatacaaaattacttatctgaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tctttctt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - accaaata
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - catacaaa