1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GCCGTTATTATCTCATCTTGGTCCGAAAACTATGGAGATCCATCTGAAAACAAAGACCTTCTTACCCAGTTCAAGAACGCTGCATCTGCCATTGCTTCTGgtgaatctcttaccttaccttggtttttgacatactgtaatatgtctttgcttccagctttattcttccactaaccacctttttattaaatcag
species | Arabidopsis thaliana |
transcript | AT1G64650.2 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: AGTTCAAGAACGCTGCATCTGCCATTGCTTCTG ATGAGAAGATCGCATTACTCGGTGCTATTCAGTCTCTGTTTGAAGGGTCCAEST: gi|86062547|gb|DR358304.1|DR358304
genomic: AGTTCAAGAACGCTGCATCTGCCATTGCTTCTGgtgaatctct ... attaaatcagATGAGAAGATCGCATTACTCGGTGCTATTCAGTCTCTGTTTGAAGGGTCCA
EST: CAAAGACCTTCTTACCCAGTTCAAGAACGCTGCATCTGCCATTGCTTCTG ATGAGAAGATCGCTTTGCTCGGTGCTATTCAGTCTCTGTTTGAAGGGTCCAEST: gi|86062546|gb|DR358303.1|DR358303
genomic: CAAAGACCTTCTTACCCAGTTCAAGAACGCTGCATCTGCCATTGCTTCTGgtgaatctct ... attaaatcagATGAGAAGATCGCATTACTCGGTGCTATTCAGTCTCTGTTTGAAGGGTCCA
EST: CAAAGACCTTCTTACCCAGTTCAAGAACGCTGCATCTGCCATTGCTTCTG ATGAGAAGATCGC-TTCGCTCGGTGCTATTCAGTCTCTGTTTGAAGGGTCC
genomic: CAAAGACCTTCTTACCCAGTTCAAGAACGCTGCATCTGCCATTGCTTCTGgtgaatctct ... attaaatcagATGAGAAGATCGCATTA-CTCGGTGCTATTCAGTCTCTGTTTGAAGGGTCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCCGTTATTATCTCATCTTGGTCCGAAAACTATGGAGATCCATCTGAAAACAAAGACCTTCTTACCCAGTTCAAGAACGCTGCATCTGCCATTGCTTCTGgtgaatctcttaccttaccttggtttttgacatactgtaatatgtctttgcttccagctttattcttccactaaccacctttttattaaatcag
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