1 5' 3' | 2 5' 3' | 3 5' 3' |
CTCTCTTGTATGTGGCTTCACGCTGGTATCATTCATCTTCTTACAAACATGTTGAGTTTGATCTTCATTGGTATCCGCCTTGAGCAGCAATTTGGCTTCAgtaagtcttacctttacgtgtacaagaattattgttcagtcaagttttagactctctttgtttaatcgccaagtgaaacatttgatctttatcgcgggaatgttactgtgcag
species | Arabidopsis thaliana |
transcript | AT1G63120.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CAATTTGGCTTCA TAAGAGTCGGGTTGATATACTTAATATCGGGTCTCGGTGGAAGCATACTTTEST: gi|124731993|gb|EH823395.1|EH823395
genomic: CAATTTGGCTTCAgtaagtctta ... tactgtgcagTAAGAGTCGGGTTGATATACTTAATATCGGGTCTCGGTGGAAGCATACTTT
EST: GAGCAGCAATTTGGCTTCA TAAGAGTCGGGTTGATATACTTAATATCGGGTCTCGGTGGAA
genomic: GAGCAGCAATTTGGCTTCAgtaagtctta ... tactgtgcagTAAGAGTCGGGTTGATATACTTAATATCGGGTCTCGGTGGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTCTCTTGTATGTGGCTTCACGCTGGTATCATTCATCTTCTTACAAACATGTTGAGTTTGATCTTCATTGGTATCCGCCTTGAGCAGCAATTTGGCTTCAgtaagtcttacctttacgtgtacaagaattattgttcagtcaagttttagactctctttgtttaatcgccaagtgaaacatttgatctttatcgcgggaatgttactgtgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCAG