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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGCTGTGATAACCTCAGGAGCTACTATGCGAGAAGCCCTTGAAGCTACTAAGGAACTTGCTTATGATTGTCGACGCAATGGCACTGCTTTCCGTCTTGGGgtaatgagccttctatctcagtgtgctcacaaatatttacagccatagagttgaataagttcctaggtgttggtcttgtgctttagattgtcactttgtt...

Basic information

species Arabidopsis thaliana
transcript AT1G33270.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|116475013|gb|EG517605.1|EG517605
EST:     AG-AACTTGCTTATGATTGTCGACGCAATGGCACTGCTTTCCGTCTTGGG                         GCTGTCCTTAGAGAATCCATGGAGAGGTTACTGCCCGATGATATTCACAT
genomic: AGGAACTTGCTTATGATTGTCGACGCAATGGCACTGCTTTCCGTCTTGGGgtaatgagcc ... gtggttttagGCTGTCCTTAGAGAATCCATGGAGAGGTTACTGCCCGATGATATTCACAT
EST: gi|116475014|gb|EG517606.1|EG517606
EST:     AGGAACTTGCTTATGATTGTCGACGCAATGGCACTGCTTTCCGTCTTGGG                         GCTGTCCTTAGAGAATCCATGGAGAGGTTACTGCCCGATGATATTCACATT
genomic: AGGAACTTGCTTATGATTGTCGACGCAATGGCACTGCTTTCCGTCTTGGGgtaatgagcc ... gtggttttagGCTGTCCTTAGAGAATCCATGGAGAGGTTACTGCCCGATGATATTCACATT
EST: gi|164088562|gb|ES176510.1|ES176510
EST:     TGATTGTCGACGCAATGGCACTGCTTTCCGTCTT-GG                         GCTGTCCTTAGAGAATCCATGGAGAGGTTACTGCCCGATGATATTCACATT
genomic: TGATTGTCGACGCAATGGCACTGCTTTCCGTCTTGGGgtaatgagcc ... gtggttttagGCTGTCCTTAGAGAATCCATGGAGAGGTTACTGCCCGATGATATTCACATT