Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCTTTGGTTCTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctttgtctccgattttgtgatttttatggtttctccttctaatctctaatgatgtacgtttttgttttgtag

Basic information

species Arabidopsis thaliana
transcript AT1G30120.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|86046243|gb|DR341998.1|DR341998
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046288|gb|DR342043.1|DR342043
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046257|gb|DR342012.1|DR342012
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046264|gb|DR342019.1|DR342019
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046249|gb|DR342004.1|DR342004
EST:     TGGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: TGG-ACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046246|gb|DR342001.1|DR342001
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046259|gb|DR342014.1|DR342014
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046232|gb|DR341987.1|DR341987
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046280|gb|DR342035.1|DR342035
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|124978614|gb|EL051767.1|EL051767
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCT
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCT
EST: gi|86046255|gb|DR342010.1|DR342010
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046294|gb|DR342049.1|DR342049
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046283|gb|DR342038.1|DR342038
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046254|gb|DR342009.1|DR342009
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046244|gb|DR341999.1|DR341999
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046252|gb|DR342007.1|DR342007
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046284|gb|DR342039.1|DR342039
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046261|gb|DR342016.1|DR342016
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046289|gb|DR342044.1|DR342044
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|124866461|gb|EH950898.1|EH950898
EST:     AAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: AAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046296|gb|DR342051.1|DR342051
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046269|gb|DR342024.1|DR342024
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046273|gb|DR342028.1|DR342028
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046272|gb|DR342027.1|DR342027
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046229|gb|DR341984.1|DR341984
EST:     CTGGRCTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046275|gb|DR342030.1|DR342030
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046233|gb|DR341988.1|DR341988
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046248|gb|DR342003.1|DR342003
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046256|gb|DR342011.1|DR342011
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046236|gb|DR341991.1|DR341991
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGGTACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046253|gb|DR342008.1|DR342008
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046271|gb|DR342026.1|DR342026
EST:     CTGGCCTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046274|gb|DR342029.1|DR342029
EST:     TGGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: TGG-ACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046282|gb|DR342037.1|DR342037
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046287|gb|DR342042.1|DR342042
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046279|gb|DR342034.1|DR342034
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046251|gb|DR342006.1|DR342006
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046270|gb|DR342025.1|DR342025
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046240|gb|DR341995.1|DR341995
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAAATGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|47830958|gb|CK120642.1|CK120642
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046285|gb|DR342040.1|DR342040
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046247|gb|DR342002.1|DR342002
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046290|gb|DR342045.1|DR342045
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046276|gb|DR342031.1|DR342031
EST:     CTGGACTTAGAGTTCGTMACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGA-GGAGGCGGATACGTCTGCGMGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046258|gb|DR342013.1|DR342013
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046241|gb|DR341996.1|DR341996
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046277|gb|DR342032.1|DR342032
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046250|gb|DR342005.1|DR342005
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046234|gb|DR341989.1|DR341989
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046267|gb|DR342022.1|DR342022
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046245|gb|DR342000.1|DR342000
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046268|gb|DR342023.1|DR342023
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046228|gb|DR341983.1|DR341983
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046295|gb|DR342050.1|DR342050
EST:     CTGGACTTAGAGTTCGTMACTCTCAGAAATTGATTCMAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046230|gb|DR341985.1|DR341985
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046281|gb|DR342036.1|DR342036
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046238|gb|DR341993.1|DR341993
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046266|gb|DR342021.1|DR342021
EST:     TGGANTTAGAGTTCGTCACTCTCAGNAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGANGCGGATACGTCTGCGAGCACTGG
genomic: TGGACTTAGAGTTCGTCACTCTCAG-AAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046265|gb|DR342020.1|DR342020
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG
EST: gi|86046286|gb|DR342041.1|DR342041
EST:     CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCG                         ACGAAGGAGGCGGATACGTCTGCGAGCACTGG
genomic: CTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctt ... tgttttgtagACGAAGGAGGCGGATACGTCTGCGAGCACTGG

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
CCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCTTTGGTTCTGGACTTAGAGTTCGTCACTCTCAGAAATTGATTCCAAATGCTGTTGCGgtaatgtctttgtctccgattttgtgatttttatggtttctccttctaatctctaatgatgtacgtttttgttttgtag

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  ATGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GCTGTT