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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CGTGGAACTGATGCATTGCCGGGGATGTCACTTCTATCGGGCTTACTAGAAACTgtaagtattacaagaaaactcaaaaggattccatttatgcaaaatctaagagaaagctcactgtggtctttggttacaatttatggatctctcaagagacaaatgctatgtaagctaattgattttggtcttgataaacag

Basic information

species Arabidopsis thaliana
transcript AT4G36440.1
intron # 15
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|86085527|gb|DR381286.1|DR381286
EST:     GAACTGATGCATTGCCGGGGATGTCACTTCTATCGGGCTTACTAGAAACT                         GTGAGTGGAAGTGGACAAAGCTACTCAAGAACTGAAGACATCAACAATGCT
genomic: GAACTGATGCATTGCCGGGGATGTCACTTCTATCGGGCTTACTAGAAACTgtaagtatta ... tgataaacagGTGAGTGGAAGTGGACAAAGCTACTCAAGAACTGAAGACATCAACAATGCT
EST: gi|164166415|gb|ES083859.1|ES083859
EST:     GAACTGATGCATTGCCGGGGATGTCACTTCTATCGGGCTTACTAGAAACT                         GTGAGTGGAAGTGGACAAAGCTACTCAAGAACT
genomic: GAACTGATGCATTGCCGGGGATGTCACTTCTATCGGGCTTACTAGAAACTgtaagtatta ... tgataaacagGTGAGTGGAAGTGGACAAAGCTACTCAAGAACT