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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTATGGTCGAGAGTATCGAGAGCGGTTGTTAAGGCAGTGGGGAATAGTCGACGTTGATGACTGTTGTGGCTGTGCTAAATACTTGgtatgttctttcttcgcctattttatgtgaacgactttgaaagcatttcctaaacttttttggtttgggcag

Basic information

species Arabidopsis thaliana
transcript AT5G36210.1
intron # 13
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: AT5G36210.1 (Arabidopsis thaliana), 5'ss of exon 13
lower sequence: GLYMA18G11480.1 (Glycine max), 5'ss of exon 13
GTTATGGTCGAGAGTATCGAGAGCGGTTGTTAAGGCAGTGGGGAATAGTCGACGTTGATGACTGTTGTGGCTGTGCTAAATACTTGgta-------tgttctttcttcgcctattttat--gtgaacgactttg----aaagcatttcctaaacttttttggtttgggcag
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GTTATGGCAGGGTGTACAGAGAACGGCTTTTGCGCCAGTGGGGAATAGTTGATGTTAATGACTGTTGTAGTTGTGCTACATATTTGgtaattgttttgttttattgtttcctacttttttggttgatggatctgttataagaaagtttatatgatataatctattatctag