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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGGCAACACTAGGAGATCTGGTGGAGGCGGTGGTCGCAACAACAAAAACAAGAAACGGTCTAGAAAAGGCAGCGACCCACTCAAAACCTTCAACCCTAATgtaaaacacaactgaatttctccatttcttctctgttttgtgtgtatatttgtgctaattttttctatgttgtttgcttacttcaatcaaccag

Basic information

species Arabidopsis thaliana
transcript AT4G34910.1
intron # 13
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|86087864|gb|DR383623.1|DR383623
EST:     AGAAACGGTCTAGAAAAGGCAGCGACCCACTCAAAACCTTCAACCCTAAT                         GGGTCTAAGAGAGGAGCCGTTGGCCAGAAGGATGGCAAAGATTCTAGCTCG
genomic: AGAAACGGTCTAGAAAAGGCAGCGACCCACTCAAAACCTTCAACCCTAATgtaaaacaca ... aatcaaccagGGGTCTAAGAGAGGAGCCGTTGGCCAGAAGGATGGCAAAGATTCTAGCTCG
EST: gi|164163455|gb|ES053083.1|ES053083
EST:     CGACCCACTCAAAACCTTCAACCCTAAT                         GGGTCTAAGAGAGGAGCCGTTGGCCAGAAGGATGGCAAAGATTCTAGCTCG
genomic: CGACCCACTCAAAACCTTCAACCCTAATgtaaaacaca ... aatcaaccagGGGTCTAAGAGAGGAGCCGTTGGCCAGAAGGATGGCAAAGATTCTAGCTCG
EST: gi|19742073|gb|AU227426.1|AU227426
EST:     AGAAACGGTCTAGAAAAGGCAGCGACCCACTCAAAACCTTCAACCCTAAT                         GGGTCTAAGAGAGGAGCCGTTGGCCAGAAGGATGGCAAAGATTCTAGCTCG
genomic: AGAAACGGTCTAGAAAAGGCAGCGACCCACTCAAAACCTTCAACCCTAATgtaaaacaca ... aatcaaccagGGGTCTAAGAGAGGAGCCGTTGGCCAGAAGGATGGCAAAGATTCTAGCTCG