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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTGAGGATGCTGTAATGCTTGCACTTTCCCGGTATAGACAGACAAATGTGGCTCGACAAGCCGTCACTGgtaaaactatatctaaaactgattggcacatataaatactgatgtgatgttatacaacagacactcatctcatcttaatatccag

Basic information

species Arabidopsis thaliana
transcript AT4G25070.2
intron # 12
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|116426422|gb|EG469014.1|EG469014
EST:     TGCACTTTCCCGGTATAGACAGACAAATGTGGCTCGACAAGCCGTCACTG                         ATCCCAGGGTGCAAGGGGAACCTAAGTTCTCCGAAACATTTG
genomic: TGCACTTTCCCGGTATAGACAGACAAATGTGGCTCGACAAGCCGTCACTGgtaaaactat ... taatatccagATCCCAGGGTGCAAGGGGAACCTAAGTTCTCCGAAACATTTG
EST: gi|116426415|gb|EG469007.1|EG469007
EST:     TGCACTTTCCCGGTATAGACAGACAAATGTGGCTCGACAAGCCGTCACTG                         ATCCCAGGGTGCAAGGGGAACCTAAGTTCTCCGAAACATTTG
genomic: TGCACTTTCCCGGTATAGACAGACAAATGTGGCTCGACAAGCCGTCACTGgtaaaactat ... taatatccagATCCCAGGGTGCAAGGGGAACCTAAGTTCTCCGAAACATTTG
EST: gi|116426421|gb|EG469013.1|EG469013
EST:     TGCACTTTCCCGGTATAGACAGACAAATGTGGCTCGACAAGCCGTCACTG                         ATCCCAGGGTGCAAGGGGAACCTAAGTTCTCCGAAACATTTG
genomic: TGCACTTTCCCGGTATAGACAGACAAATGTGGCTCGACAAGCCGTCACTGgtaaaactat ... taatatccagATCCCAGGGTGCAAGGGGAACCTAAGTTCTCCGAAACATTTG
EST: gi|116426413|gb|EG469005.1|EG469005
EST:     TGCACTTTCCCGGTATAGACAGACAAATGTGGCTCGACAAGCCGTCACTG                         ATCCCAGGGTGCAAGGGGAACCTAAGTTCTCCGAAACATTTG
genomic: TGCACTTTCCCGGTATAGACAGACAAATGTGGCTCGACAAGCCGTCACTGgtaaaactat ... taatatccagATCCCAGGGTGCAAGGGGAACCTAAGTTCTCCGAAACATTTG
EST: gi|116426408|gb|EG469000.1|EG469000
EST:     TGCACTTTCCCGGTATAGACAGACAAATGTGGCTCGACAAGCCGTCACTG                         ATCCCAGGGTGCAAGGGGAACCTAAGTTCTCCGAAACATTTG
genomic: TGCACTTTCCCGGTATAGACAGACAAATGTGGCTCGACAAGCCGTCACTGgtaaaactat ... taatatccagATCCCAGGGTGCAAGGGGAACCTAAGTTCTCCGAAACATTTG
EST: gi|116426418|gb|EG469010.1|EG469010
EST:     TGCACTTTCCCGGTATAGACAGACAAATGTGGCTCGACAAGCCGTCACTG                         ATCCCAGGGTGCAAGGGGAACCTAAGTTCTCCGAAACATTTG
genomic: TGCACTTTCCCGGTATAGACAGACAAATGTGGCTCGACAAGCCGTCACTGgtaaaactat ... taatatccagATCCCAGGGTGCAAGGGGAACCTAAGTTCTCCGAAACATTTG