1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
AAATACCCTGACAACCTTGACAAAGCAGCCGAGCTTGCAGTTTCAACGTTGCAGgtaatagtctaaacttgtaaagctacaaacttctcttactatgttattgttactcacaaaagttaattatggtgagcag
species | Arabidopsis thaliana |
transcript | AT5G37850.3 |
intron # | 11 |
splice site | 5' |
intron type | U2 |
EST: ACCCTGACAACCTTGACAAAGCAGCCGAGCTTGCAGTTTCAACGTTGCAG GCGCTTTTGCGAAGGACGCTTGATGATTACAAACGAGCTGGGTATGATCCTEST: gi|86083486|gb|DR379245.1|DR379245
genomic: ACCCTGACAACCTTGACAAAGCAGCCGAGCTTGCAGTTTCAACGTTGCAGgtaatagtct ... tggtgagcagGCGCTTTTGCGAAGGACGCTTGATGATTACAAACGAGCTGGGTATGATCCT
EST: ACCCTGACAACCTTGACAAAGCAGCCGAGCTTGCAGTTTCAACGTTGCAG GCGCTTTTGCGAAGGACGCTTGATGATTACAAACGAGCTGGGTATGATCCTEST: gi|164072206|gb|EL982887.1|EL982887
genomic: ACCCTGACAACCTTGACAAAGCAGCCGAGCTTGCAGTTTCAACGTTGCAGgtaatagtct ... tggtgagcagGCGCTTTTGCGAAGGACGCTTGATGATTACAAACGAGCTGGGTATGATCCT
EST: ACCCTGACAACCTTGACAAAGCAGCCGAGCTTGCAGTTTCAACGTTGCAG GCACTTTTGCGAAGGACGCTTGA
genomic: ACCCTGACAACCTTGACAAAGCAGCCGAGCTTGCAGTTTCAACGTTGCAGgtaatagtct ... tggtgagcagGCGCTTTTGCGAAGGACGCTTGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAATACCCTGACAACCTTGACAAAGCAGCCGAGCTTGCAGTTTCAACGTTGCAGgtaatagtctaaacttgtaaagctacaaacttctcttactatgttattgttactcacaaaagttaattatggtgagcag
- - - - - - - - - - - - - - - GAGCTT