1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
TGGGTAGATGAAGCTGGAGGAATGGAGACTCTAGGGAAAGTTCTTCTCAGACGTAAAAAGACCCAAGAGGTTCCTCAATTCACTGCCCCTGAGgtaaaaatgcttacagacttctcaatgatctctctctctctcaaaacctttaagctttggctccacttaagattgactgatgatatcgtgtgaacag
species | Arabidopsis thaliana |
transcript | AT1G73110.1 |
intron # | 11 |
splice site | 5' |
intron type | U2 |
EST: TTCTCAGACGTAAAAAGACCCAAGAGGTTCCTCAATTCACTGCCCCTGAG CAAACGGTGGAAGCATTGCTGGAATCAGEST: gi|19799883|gb|AU231173.1|AU231173
genomic: TTCTCAGACGTAAAAAGACCCAAGAGGTTCCTCAATTCACTGCCCCTGAGgtaaaaatgc ... gtgtgaacagCAAACGGTGGAAGCATTGCTGGAATCAG
EST: TTCTCAGACGTAAAAAGACCCAAGAGGTTCCTCAATTCACTGCCCCTGAG CAAACGGTGGAAGCATTGCTGGAATCAGGGTACTCACTCATAAATGAACAGEST: gi|124846779|gb|EH931216.1|EH931216
genomic: TTCTCAGACGTAAAAAGACCCAAGAGGTTCCTCAATTCACTGCCCCTGAGgtaaaaatgc ... gtgtgaacagCAAACGGTGGAAGCATTGCTGGAATCAGGGTACTCACTCATAAATGAACAG
EST: TTCTCAGACGTAAAAAGACCCAAGAGGTTCCTCAATTCACTGCCCCTGAG CAAACGGTGGAAGCATTGCTGGAATCAGGG
genomic: TTCTCAGACGTAAAAAGACCCAAGAGGTTCCTCAATTCACTGCCCCTGAGgtaaaaatgc ... gtgtgaacagCAAACGGTGGAAGCATTGCTGGAATCAGGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGGGTAGATGAAGCTGGAGGAATGGAGACTCTAGGGAAAGTTCTTCTCAGACGTAAAAAGACCCAAGAGGTTCCTCAATTCACTGCCCCTGAGgtaaaaatgcttacagacttctcaatgatctctctctctctcaaaacctttaagctttggctccacttaagattgactgatgatatcgtgtgaacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGG