Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|19877605|gb|AU238436.1|AU238436EST: ACCATGGCTGGGACAATGAGCTCGAGTGTCACTTCATCAACGAAGACTCG GTGATTGATGAGCTTGACGATGCTATGATAGAAGGAGGGAACATTGTGGAC
genomic: ACCATGGCTGGGACAATGAGCTCGAGTGTCACTTCATCAACGAAGACTCGgttagtttct ... tgtggatcagGTGATTGATGAGCTTGACGATGCTATGATAGAAGGAGGGAACATTGTGGAC
EST:
gi|47829067|gb|CK118751.1|CK118751EST: ACCATGGCTGGGACAATGAGCTCGAGTGTCACTTCATCAACGAAGACTCG GTGATTGATGAGCTTGACGATGCTATGATAGAAGGAGGGAACATTGTGGAC
genomic: ACCATGGCTGGGACAATGAGCTCGAGTGTCACTTCATCAACGAAGACTCGgttagtttct ... tgtggatcagGTGATTGATGAGCTTGACGATGCTATGATAGAAGGAGGGAACATTGTGGAC
EST:
gi|47827879|gb|CK117563.1|CK117563EST: ACCATGGCTGGGACAATGAGCTCGAGTGTCACTTCATCAACGAAGACTCG GTGATTGATGAGCTTGACGATGCTATGATAGAAGGAGGGAACATTGTGGAC
genomic: ACCATGGCTGGGACAATGAGCTCGAGTGTCACTTCATCAACGAAGACTCGgttagtttct ... tgtggatcagGTGATTGATGAGCTTGACGATGCTATGATAGAAGGAGGGAACATTGTGGAC
EST:
gi|301503180|gb|HO208720.1|HO208720EST: ACCATGGCTGGGACAATGAGCTCGAGTGTCACTTCATCAACGAAGACTCG GTGATTGATGAGCTTGACGATGCTATGATAGAAGGAGGGAACATTGTGGAC
genomic: ACCATGGCTGGGACAATGAGCTCGAGTGTCACTTCATCAACGAAGACTCGgttagtttct ... tgtggatcagGTGATTGATGAGCTTGACGATGCTATGATAGAAGGAGGGAACATTGTGGAC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GAATCTCCGGTATATTTGCATCGGAGATCTGGTCAAAGAGAAAGAATTCTACCATGGCTGGGACAATGAGCTCGAGTGTCACTTCATCAACGAAGACTCGgttagtttcttactccatccctatccctttatcctccttatttccttgtcaacaaaacactttgaaccgttgctagaatcttaagcttcactctttagtttgataaagatttggattcaattcgaagaattagccttcttagctatattgtattgaacttgtggatcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CGAAGA