1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
AAAACAACCCCTTGAGATTTCCGAAGATCATCAAATCCAAAACCCTAGAAACCGAACAAAAGgtaggtcaaaattagctccgataaatctcgatttcgatttgaatcatcgttactcttagggtttattcgtttcccagttcttgatcttcgtcgtttgatt...
species | Arabidopsis thaliana |
transcript | AT5G56150.2 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TGAGATTTCCGAAGATCATCAAATCCAAAACCCTAGAAACCGAACAAAAGCTAGCAGEST: gi|125043395|gb|EL115664.1|EL115664
genomic: TGAGATTTCCGAAGATCATCAAATCCAAAACCCTAGAAACCGAAC--AA---A--AGgtaggtcaaa ... tagc
EST: TGAGATTTCCGAAGATCATCAAATCCAAAACCCTAGAAACCGAACAAAAG AAGCTAGGACTATTCAA
genomic: TGAGATTTCCGAAGATCATCAAATCCAAAACCCTAGAAACCGAACAAAAGgtaggtcaaa ... tagctagcagAAGCTAGGACTATTCAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAAACAACCCCTTGAGATTTCCGAAGATCATCAAATCCAAAACCCTAGAAACCGAACAAAAGgtaggtcaaaattagctccgataaatctcgatttcgatttgaatcatcgttactcttagggtttattcgtttcccagttcttgatcttcgtcgtttgatt
- - - - - - - - - - CGAAGA
- - - - - - - - - - - - AGATCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tcgtttcc