Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|86061083|gb|DR356840.1|DR356840EST: TGCCATCGCAGAAGTTGATCTCAACAAGTGTGAGCCTTGGCAACTTCCCG GGAGAGCTAAGATGGGAGAGAAAGAATGGTACTTCTTTAGCCTCCGTGACC
genomic: TGCCATCGCAGAAGTTGATCTCAACAAGTGTGAGCCTTGGCAACTTCCCGgtaagaaaat ... tgttacttagGGAGAGCTAAGATGGGAGAGAAAGAATGGTACTTCTTTAGCCTCCGTGACC
EST:
gi|164211203|gb|ES034157.1|ES034157EST: CTCAACAAGTGTGAGCCTTGGCAACTTCCCG GGAGAGCTAAGATGGGAGAGAAAGAATGGTACTTCTTTAGCCTCCGTGACC
genomic: CTCAACAAGTGTGAGCCTTGGCAACTTCCCGgtaagaaaat ... tgttacttagGGAGAGCTAAGATGGGAGAGAAAGAATGGTACTTCTTTAGCCTCCGTGACC
EST:
gi|86061082|gb|DR356839.1|DR356839EST: TGCCATCGCAGAAGTTGATCTCAACAAGTGTGAGCCTTGGCAACTTCCCG GGAGAGCTAAGATGGGAGAGAAAGAATGGTACTTCTTTAGCCTCCGTGACC
genomic: TGCCATCGCAGAAGTTGATCTCAACAAGTGTGAGCCTTGGCAACTTCCCGgtaagaaaat ... tgttacttagGGAGAGCTAAGATGGGAGAGAAAGAATGGTACTTCTTTAGCCTCCGTGACC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
ATCACTCATTACCTTCTCCGCAAAGTCCTCGACGGTTGCTTCTCAAGCCGTGCCATCGCAGAAGTTGATCTCAACAAGTGTGAGCCTTGGCAACTTCCCGgtaagaaaatacaaaactaacttacttgtagttcttttgtaattaaggtttctgaaatctttactctcaatgttacttag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGT