Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|116442164|gb|EG484756.1|EG484756EST: TGCCGTTTTGTCTCCTCTCTCTAAGCCTCATCATCATCACTCTCGTCAAG TGATTCGTGAACAAGAGGAGGAAGATAACATGAAGAATGTATTCAAGTTCC
genomic: TGCCGTTTTGTCTCCTCTCTCTAAGCCTCATCATCATCACTCTCGTCAAGgttcattccc ... ttttcaaaagTGATTCGTGAACAAGAGGAGGAAGATAACATGAAGAATGTATTCAAGTTCC
EST:
gi|116438795|gb|EG481387.1|EG481387EST: TGCCGTTTTGTCTCCTCTCTCTAAGCCTCATCATCATCACTCTCGTCAAG TGATTCGTGAACAAGAGGAGGAAGATAACATGAAGAATGTATTCAAGTTCC
genomic: TGCCGTTTTGTCTCCTCTCTCTAAGCCTCATCATCATCACTCTCGTCAAGgttcattccc ... ttttcaaaagTGATTCGTGAACAAGAGGAGGAAGATAACATGAAGAATGTATTCAAGTTCC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
AGACTTGTGGTGCTTCCTTTCTCCATCGGATGTATCTCCGTCTCAAGTGTTGCCGTTTTGTCTCCTCTCTCTAAGCCTCATCATCATCACTCTCGTCAAGgttcattccctctctctttttaaatatcatgtatatatatattgaattaatatctcatgtatcttctattgtgatatataccttgatgtgttttcaaaag
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