1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
ACCTGCCTTCTACGCTGCTTGTACCTTTGGTGGAATTCTCAGCTGTGGTCTTACTCACATGACCGTGACTCCTCTCGATCTCGTCAAGTGCAATATGCAGgtatgtaacctttagatccgttgtctttcgtttgttttctgagctcatgtttgtggatctgtgttcctgtgttgtttaggtagtgagatctgtgttgcta...
species | Arabidopsis thaliana |
transcript | AT5G14040.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TTACTCACATGACCGTGACTCCTCTCGATCTCGTCAAGTGCAATATGCAG ATTGATCCAGCGAAGTACAAGAGCATCTCGTCTGGTTTTGGAATTTTGCTGEST: gi|164130863|gb|ES172192.1|ES172192
genomic: TTACTCACATGACCGTGACTCCTCTCGATCTCGTCAAGTGCAATATGCAGgtatgtaacc ... tgttatccagATTGATCCAGCGAAGTACAAGAGCATCTCGTCTGGTTTTGGAATTTTGCTG
EST: TTACTCACATGACCGTGACTCCTCTCGATCTCGTCAAGTGCAATATGCAG ATTGATCCAGCGAAGTACAAGAGCATCEST: gi|116450593|gb|EG493185.1|EG493185
genomic: TTACTCACATGACCGTGACTCCTCTCGATCTCGTCAAGTGCAATATGCAGgtatgtaacc ... tgttatccagATTGATCCAGCGAAGTACAAGAGCATC
EST: TTACTCACATGACCGTGACTCCTCTCGATCTCGTCAAGTGCAATATGCAG ATTGATCCAGCGAAGTACAAGAGCATCTCGTCTGGTTTTGGAATTTTGCTGEST: gi|116407737|gb|EG450329.1|EG450329
genomic: TTACTCACATGACCGTGACTCCTCTCGATCTCGTCAAGTGCAATATGCAGgtatgtaacc ... tgttatccagATTGATCCAGCGAAGTACAAGAGCATCTCGTCTGGTTTTGGAATTTTGCTG
EST: TTACTCACATGACCGTGACTCCTCTCGATCTCGTCAAGTGCAATATGCAG ATTGATCCAGCGAAGTACAAGAGCATCTCGTCTGGTTTTGGAATTTTGCTGEST: gi|47829640|gb|CK119324.1|CK119324
genomic: TTACTCACATGACCGTGACTCCTCTCGATCTCGTCAAGTGCAATATGCAGgtatgtaacc ... tgttatccagATTGATCCAGCGAAGTACAAGAGCATCTCGTCTGGTTTTGGAATTTTGCTG
EST: TTACTCACATGACCGTGACTCCTCTCGATCTCGTCAAGTGCAATATGCAG ATTGATCCAGCGAAGTACAAGAGCATCTCGTCTGGTTTTGGAATTTTGCTGEST: gi|47829559|gb|CK119243.1|CK119243
genomic: TTACTCACATGACCGTGACTCCTCTCGATCTCGTCAAGTGCAATATGCAGgtatgtaacc ... tgttatccagATTGATCCAGCGAAGTACAAGAGCATCTCGTCTGGTTTTGGAATTTTGCTG
EST: TTACTCACATGACCGTGACTCCTCTCGATCTCGTCAAGTGCAATATGCAG ATTGATCCAGCGAAGTACAAGAGCATCTCGTCTGGTTTTGGAATTTTGCTGEST: gi|125270359|gb|EL284444.1|EL284444
genomic: TTACTCACATGACCGTGACTCCTCTCGATCTCGTCAAGTGCAATATGCAGgtatgtaacc ... tgttatccagATTGATCCAGCGAAGTACAAGAGCATCTCGTCTGGTTTTGGAATTTTGCTG
EST: TTACTCACATGACCGTGACTCCTCTCGATCTCGTCAAGTGCAATATGCAG ATTGATCCAGCGAAGTAEST: gi|47827833|gb|CK117517.1|CK117517
genomic: TTACTCACATGACCGTGACTCCTCTCGATCTCGTCAAGTGCAATATGCAGgtatgtaacc ... tgttatccagATTGATCCAGCGAAGTA
EST: TTACTCACATGACCGTGACTCCTCTCGATCTCGTCAAGTGCAATATGCAG ATTGATCCAGCGAAGTACAAGAGCATCTCGTCTGGTTTTGGAATTTTGCTG
genomic: TTACTCACATGACCGTGACTCCTCTCGATCTCGTCAAGTGCAATATGCAGgtatgtaacc ... tgttatccagATTGATCCAGCGAAGTACAAGAGCATCTCGTCTGGTTTTGGAATTTTGCTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACCTGCCTTCTACGCTGCTTGTACCTTTGGTGGAATTCTCAGCTGTGGTCTTACTCACATGACCGTGACTCCTCTCGATCTCGTCAAGTGCAATATGCAGgtatgtaacctttagatccgttgtctttcgtttgttttctgagctcatgtttgtggatctgtgttcctgtgttgtttaggtagtgagatctgtgttgcta
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